| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_00901 |
|---|
| Symbol | |
|---|
| ID | 4720225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 94873 |
|---|
| End bp | 95553 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640079752 |
|---|
| Product | transcriptional regulator |
|---|
| Protein accession | YP_001010406 |
|---|
| Protein GI | 123965325 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
|---|
| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.66751 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGAAA GAAATCATTT TTTATTAGTT GGCAATAGCA GACTTCACTG GGCAGAAAAT
TTAAAAAATC AGTATAGGTT CTTTCACACA CAAAAGAATA GTAAAATACC GCAAAATATC
AATTTAAAGA GTTTAGTTTG GGCATCAGTT GGGGAACTGA CTGATTTGTC TCTTAAACAA
GAAAATGAAA TAACTACTAA AGATATTAAA TTACAAAACC TTCCGCATTA TTTTGGAGTT
GATAGAGCTC TTGGTTGTTT GGAAGCTTCA AAAATAATTG AAAATCCCTC CAAGAAAAAC
CTATTAGTAG CAGATTGTGG GACGACTTTA TCACTTACGA AGTTAACTGC GGAGGGCTCT
ATTATCGGTG GGCAAATTGC ACCTGGTTTT CTTACGCAAC TGAGATCTAT GGAAAAATTT
ACCAAGAATC TCAAAGCTCC TAAAAAATAT GATATCCCTA TTCAAGATTT TTTAATTAAT
ACAGAAGATG CAATGTTAAA AGGTGTATCT AATTCTCTAA TGGGTGTAAT TAATTCATCA
TTTGAACCCG CAAAAGACAT TTTGATTATA TGCGGAGGTG ACTCTGAATT AATTGGAAGT
AGATTAAAGC AAAAGAATAA AGATATTGTT ATCGCCCCGA ATTTAGTTAT GCAAGGTATG
ATTACACATT TCAATCACTG A
|
|---|
| Protein sequence | MFERNHFLLV GNSRLHWAEN LKNQYRFFHT QKNSKIPQNI NLKSLVWASV GELTDLSLKQ
ENEITTKDIK LQNLPHYFGV DRALGCLEAS KIIENPSKKN LLVADCGTTL SLTKLTAEGS
IIGGQIAPGF LTQLRSMEKF TKNLKAPKKY DIPIQDFLIN TEDAMLKGVS NSLMGVINSS
FEPAKDILII CGGDSELIGS RLKQKNKDIV IAPNLVMQGM ITHFNH
|
|---|
| |