Gene P9515_00771 details

Gene Information

• Locus tag: P9515_00771
• Symbol: def
• ID: 4719954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: -
• Start bp: 81376
• End bp: 81987
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640079739
• Product: peptide deformylase
• Protein accession: YP_001010393
• Protein GI: 123965312
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0342378
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCAAATA ATTTTTCACA GTTAGCAAAA AAATCTCGCA ATGAACTTTC TTCCTCAAAA 
GTTAAGAAGG AGGTCATAGA AAACCCTCCA TTAGAAATAT TTAAATTAGG TAATGATGTC 
TTAAGAACTA ATGCCAAAAG AATTGGAAAG GTTGATTTAG ATACAAGAAA TTTAGCAAAA 
GACATGCTAA AAAGTATGTA TTCTGCGAAA GGAATAGGTT TAGCCGCTCC ACAAGTTGGT 
ATTAGTAAAG AATTACTTGT AATTGATATA AATTTTGAAG ACTCTGCAGC AGAGCCTCTT 
ATTTTGATAA ATCCAGAAAT AACAGCTTTT GGTAACACTC TTAATTCTTA TGAAGAAGGT 
TGTTTGAGTA TACCTGGTGT ATATTTAAAT GTAGTCAGGC CATCAACAAT TAAATTAAGA 
TTTAGTGATG AGATGGGAAG ACCAAGAAAG ATGAATGCTG ATGGACTTTT AGCAAGATGC 
ATTCAACATG AAGTGGACCA TTTAAGGGGG GTTCTTTTTG TAGACAGAGT TACATCCAAA 
GAAGATTTAA AAACTGAACT AAAAAAAGAA GGATTCCAAA TGAAAGATGT GTTTCCAATA 
AGTCAATCTT AA 

 

Protein sequence

MANNFSQLAK KSRNELSSSK VKKEVIENPP LEIFKLGNDV LRTNAKRIGK VDLDTRNLAK 
DMLKSMYSAK GIGLAAPQVG ISKELLVIDI NFEDSAAEPL ILINPEITAF GNTLNSYEEG 
CLSIPGVYLN VVRPSTIKLR FSDEMGRPRK MNADGLLARC IQHEVDHLRG VLFVDRVTSK 
EDLKTELKKE GFQMKDVFPI SQS