| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_00521 |
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| Symbol | speA |
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| ID | 4719928 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | - |
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| Start bp | 56561 |
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| End bp | 58507 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640079713 |
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| Product | arginine decarboxylase |
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| Protein accession | YP_001010368 |
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| Protein GI | 123965287 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1166] Arginine decarboxylase (spermidine biosynthesis) |
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| TIGRFAM ID | [TIGR01273] arginine decarboxylase, biosynthetic |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.325981 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAATT TTGACTCAAA AAAATTAAAT AAACATTGGA CCATAGAAGA TAGTATTTCT
ACATATGGTA TTGATAAATG GGGAGATCAG TATTTTTCAA TAAATTCATT AGGCAATATA
TCGATAACCC CAAATAGAAA CTCTAAAAAA ACAATTGATC TTTTTAAACT TGTTAATGAA
ATTAAAAGTA GAGAAATAAA TACTCCTTTA ATATTAAGAT TTAACGACAT TTTAAAAGAC
CGAATCACAG AATTAAATAA TGCCTTCTCC CAAGCAATAG AAACTTATAA CTATAAAAAT
ATTTTTCAAG GAGTTTTTCC TATCAAATGT AATCAGCAAA AAAATGTATT AGAAAAAATC
ATTGAATATG GAGATTATTG GGACTTTGGT TTAGAGGTAG GAAGCAAGTC AGAATTATTA
ATTGGATTAT CATTGCTAGA AAATAAAAAA TCACTTTTAA TTTGTAATGG ATATAAAGAT
AAAAAGTATA TTGAGATCGC AATACTAGCC AGAAAACTTG GTAAACAGCC AATTATAGTT
ATTGAGCAAA TAGATGAAGT TCAAAGAATT ATTGAAGCTG TCAAAAATCT CAGATCAACA
CCTATACTTG GCATCAGATC AAAGTTATCA AGCAAAAGTA GTGGGAGATG GGGTAAATCA
GTTGGAGATA ACTCCAAATT TGGATTATCA ATTCCGGAAA TAATGTTAAC CATAAAAGAA
CTTAAAGAAG CAAGCTTAAT TAATGAAATG AAGTTGCTGC ATTTCCATAT TGGAAGCCAA
ATAAGTGATA TTTCAGTAAT AAAAGACGCA TTGCAAGAAG CGAGTCAAAT ATTTGTTGAA
TTATCTAAGT TAGGCGCACC AATGAAATAT ATAGATGTGG GAGGCGGCTT AGGAATAGAC
TTCGATGGAA CTAAAACGTC TTCCAATACT TCGACAAATT ATTCTCTTCA AAACTATGCG
AATGATGTCG TAGCAACAAT CAAAGATTCA TGTGAAGTAA ATAATATTCA ACATCCAATC
ATAATCTCAG AAAGCGGGAG AGCTATAGTA AGTCACTGTT CAGTTTTAAT TTTTGATGTT
TTAGGAACAA GTCATGTCAG CTCTCAAATA AAAGTATCAC ACCAAAAAAA GACATCATTA
ATCATCAAAA ATCTTATTGA TACCCATAAT CAACTTAAAA ATCTTAGAAA CAAAAAAGAA
GATTTATCTG AAATTATAGA ATTATGGAAC GACGCTAAAA AATTCAAAAA GGATTGCTTA
GTCGCTTTTA GATTGGGATT TATAAGTTTG GGGGAACGTG CTTATGCCGA AGAACTTACA
TGGGCATGTG CAAAAGAGAT TTCAAGTCAC TTAGATAATG AAAAAATTAT CCATCCAGAC
TTATCTGAGA TAACCGAAAC GCTTTCATCA ACTTATTACG CTAATTTGTC AGTTTTCAAA
TCTATTCCGG ATACTTGGGC AATTAATCAA ATTTTTCCAA TTATTCCAAT ACACAGACAT
TTAGAAGAAC CCATATGTAA AGGTAATTTT GCCGATTTAA CTTGTGATTC TGATGGCAAA
CTAAATAATT TTATTGACAA TGGGAAAATT AAATCACTTC TAAATTTACA TCGCCCAGAA
GAGAACAATG ATTATTTAAT AGGAATCTTT ATGGCAGGTG CATATCAAGA GGCATTAGGG
AATTTTCATA ATCTATTTGG AAATACTAAT GTTATTCATA TTGATATAAA TGAAGATAAT
ACATATAAAA TTAAAAATAT TATTAAAGAA AACAGCAAAT CAGAAATTTT AGAATTATTA
GATTACAGTT CAGATAATTT AGTCGAATCA ATAAGAATTA ATACCGAATT TGCCATCAAT
AATAAAACCT TGAGTATTGA AGAAGCACGA AAATTAATTG ATCAAATAGA GACGAGTTTA
AGAAAAAGTA GTTATTTATC AGAATAA
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| Protein sequence | MTNFDSKKLN KHWTIEDSIS TYGIDKWGDQ YFSINSLGNI SITPNRNSKK TIDLFKLVNE
IKSREINTPL ILRFNDILKD RITELNNAFS QAIETYNYKN IFQGVFPIKC NQQKNVLEKI
IEYGDYWDFG LEVGSKSELL IGLSLLENKK SLLICNGYKD KKYIEIAILA RKLGKQPIIV
IEQIDEVQRI IEAVKNLRST PILGIRSKLS SKSSGRWGKS VGDNSKFGLS IPEIMLTIKE
LKEASLINEM KLLHFHIGSQ ISDISVIKDA LQEASQIFVE LSKLGAPMKY IDVGGGLGID
FDGTKTSSNT STNYSLQNYA NDVVATIKDS CEVNNIQHPI IISESGRAIV SHCSVLIFDV
LGTSHVSSQI KVSHQKKTSL IIKNLIDTHN QLKNLRNKKE DLSEIIELWN DAKKFKKDCL
VAFRLGFISL GERAYAEELT WACAKEISSH LDNEKIIHPD LSEITETLSS TYYANLSVFK
SIPDTWAINQ IFPIIPIHRH LEEPICKGNF ADLTCDSDGK LNNFIDNGKI KSLLNLHRPE
ENNDYLIGIF MAGAYQEALG NFHNLFGNTN VIHIDINEDN TYKIKNIIKE NSKSEILELL
DYSSDNLVES IRINTEFAIN NKTLSIEEAR KLIDQIETSL RKSSYLSE
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