Gene P9515_00501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00501 
Symbol 
ID4719926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp52026 
End bp53801 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content35% 
IMG OID640079711 
Productflavoprotein 
Protein accessionYP_001010366 
Protein GI123965285 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0426] Uncharacterized flavoproteins
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAACTT CTGCGAAAAC AAGTACTTCA GATATGATCA AAGTCGAGCA AAAATTATCT 
GTACAATATA AAACTTTTGC GGCTGACTCA AGTGCAATCA GATCTTTAGA CTGGGAACGT
AGTAGGTTCG ATATTGAATT TGGGTTAAGA AATGGAACTA CATACAATAG TTTTATCATT
CAGGGTCAAA AACTAGCAAT CATTGATACA AGCCACTCTA AATTTAAAAA ACTATGGTTT
GAGCAATTAC TAAAAGAAGT TAATCCTGAA AAAATTGATT ATTTAATTAC TAGCCATACA
GAGCCGGACC ACTCAGGTTT AATAGGCAAT CTCTTAAGCC TTAATCCTCA CATAACAGTG
GTCGGTTCAA AATTAGCCCT TAAATTTATT GAGGACCAAA TACATGTTCC ATTTAAAAGT
TTAGAAGTAA AAAGCGGACA ATATTTAGAT CTTGGAGATA ACCCCACCAG TGGAGTAAAT
CATAATATTG AATTTATAAG TGCGCCAAAT TTACATTGGC CTGATACCAT TTTCTCCTAC
GATCACGGTA CAAATGTTTT ATATACATGC GACGCTTTTG GATTGCATTA TTGCTCTGAT
GAATTTTTTG ATAGTAATCA AAAAGAAATA TATGATGATT TTCGTTTTTA TTACGATTGC
CTAATGGGAC CAAATGCAAG AAGTGTTCTG CAAGCTATTA AGAGAATAAA TAAGTTGCCT
GAACTCAAAA CTATTGCAGT TGGTCATGGG CCTTTGCTTC ATAATCAAGT GAATTTTTGG
AAAGATAAGT ACCTAGAATG GAGCGCTAAT AAGAGTAAAG GCAATGAATT TGTGTCTGTT
TGCTATATAA GTGATTATGG TTATTGTGAT CGACTAAGCC AAGCCATATC TCACGGCATT
AGTAAAGCAG ATGCTCAGGT TCAATTAATC GATTTAAGAT CTTCAGATTC TCAAGAATTA
ACAGGTTTAA TTACTGAATC TAAAGCAGTA GTAATTCCAA CTTGGCCAGT TAATTCTGAT
AATGATTTAA AGGAATCTCT TGGTACTCTC TTTGCAGCAC TAAAGCCTAA ACAATTTACA
GCTGTTTACG ATGCTTTTGG AGGCGATGAT GAACCTATAG ATTCATTATC TAATAAATTA
AGAGAACTAG GACAAAAAGA AGCTTTTTCA CCTCTAAGAG TTAGAAATAT TCCGGATCCT
ATTATCTATC AACAATTTGA AGAAGCTGGA ACTGATTTGG GGCAATTAAT CAATAAGAAA
AAAAATATTG CCTCAATGAA AAGCCTTGAT TCTAATTTGG ATAAAGCTTT AGGAAGATTA
AGCGGTGGTT TATATGTCGT GACAGCAAGT CAAGGAGAGA ACTCAACTTT TAGACAAAGT
GCTATGGTGG CAAGCTGGGT AAGTCAAGCA AGTTTCAGCC CGCCTGGTAT TACTGTTGCG
GTAGCAAAAG ATAGAGCTAT TGAATCTTTC ATGCAAGTTG GGAAGGGTTT TGTAGTGAAT
ATTTTACGAG AGGATAACTA TCAAAAAATG TTTAGACATT TTTTAAAAAG ATTTGCACCT
GGAGCTGATA GATTTGCGGA TGTTGATGTA ATTAGCAACA TTGCAAATGG AGGTCCTGTT
CTTTCTGATT CTCTCGCGTT TCTAGATTGT AAAGTAAGTT CTCGGTTAGA AACTCCAGAT
CATTGGATTA TTTACGGTAT AGTTGAGAAT GGAAGTGTAT CCGATTTATC CTGTAAGACA
GCTGTTCATC ATAGGAAGGT TGCGAACCAC TACTAA
 
Protein sequence
MITSAKTSTS DMIKVEQKLS VQYKTFAADS SAIRSLDWER SRFDIEFGLR NGTTYNSFII 
QGQKLAIIDT SHSKFKKLWF EQLLKEVNPE KIDYLITSHT EPDHSGLIGN LLSLNPHITV
VGSKLALKFI EDQIHVPFKS LEVKSGQYLD LGDNPTSGVN HNIEFISAPN LHWPDTIFSY
DHGTNVLYTC DAFGLHYCSD EFFDSNQKEI YDDFRFYYDC LMGPNARSVL QAIKRINKLP
ELKTIAVGHG PLLHNQVNFW KDKYLEWSAN KSKGNEFVSV CYISDYGYCD RLSQAISHGI
SKADAQVQLI DLRSSDSQEL TGLITESKAV VIPTWPVNSD NDLKESLGTL FAALKPKQFT
AVYDAFGGDD EPIDSLSNKL RELGQKEAFS PLRVRNIPDP IIYQQFEEAG TDLGQLINKK
KNIASMKSLD SNLDKALGRL SGGLYVVTAS QGENSTFRQS AMVASWVSQA SFSPPGITVA
VAKDRAIESF MQVGKGFVVN ILREDNYQKM FRHFLKRFAP GADRFADVDV ISNIANGGPV
LSDSLAFLDC KVSSRLETPD HWIIYGIVEN GSVSDLSCKT AVHHRKVANH Y