| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_00371 |
|---|
| Symbol | |
|---|
| ID | 4719868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 36830 |
|---|
| End bp | 39763 |
|---|
| Gene Length | 2934 bp |
|---|
| Protein Length | 977 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640079698 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001010353 |
|---|
| Protein GI | 123965272 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4889] Predicted helicase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGCAACCT TTGATGAATT TTATGCTTCC TTAGATCCTG ATATTGGGAT TAGAGGAAAG
CAATTTGAAA AATTCGTTAA ATGGTTTCTT AAGACTGATC CGACATGGGC AAGTCAAATA
GATGAAGTGT GGTTATGGAA TGATTATCCA AAGAGATGGG GTGCTGATTG CGGAATAGAT
TTAATCTTTA CTCAAAAGAA TGGGAAGACC TGGGCAGTTC AATCAAAATG TGTTTCACCA
AATAATGATA TTAAGAAATC TGAAATAGAT AGTTTTTTAA GTGAATCGAG TGACTCGAAA
ATTGATGGAA GATTATTAAT CGCAAGTACT GATGGAATTG GAAAGAATGC TCAACAGGTA
ATTAATCGTC AAGAAAAGCA AGTTGTCTGT TTTTTATTAG AACAGTTCAG ACAATCTGAA
ATTGAATTTC CTTCATCAAT GGAAGACCTT AATCAAGGTA AAAGAAAAAA GAAAAAGACT
CCTAGACCAC ATCAAATCGA AGCAATTGAA AAAGTTTCTG AAAGATTAAA AACTGCTGAT
CGTGGTCAAG TTCTAATGGC ATGTGGAACT GGTAAAACTC TTACATCTTT ATGGATTAAA
GAAAAAATGA AAGCGAAACA AGTTTTAGTT TTAGTTCCAT CTTTAAGTCT TCTTTCTCAA
ACTCTGAAAG AATGGAATTC TGAAGCAAAT CATGACTTTA AGTGGATTTG TGTTTGCTCT
GATAAATCAG TTGCAAAAGA TAAAAAGGAA GACGAATGGA TTTCAAATAC GTCAGAAATT
GGGGTTCCAG TTACAAATGA TCCATTAGAA ATTAAACTTT TTTTAGATGA AAGTAGTCCT
AAAGTTGTTT TCTCAACTTA TCAATCTGCA CAATTGATAG TAGAAGCACA AGAGCATCAT
GACACCGATG ATTTTGATCT CGTAATTGCA GATGAAGCAC ATCGTTGTGC AGGAAAAGTA
TCTGATTCTT TTGGTTCAGT ATTAGATGAA AGAAAAATAA AAGCATCAAA AAGATTATTC
TTTACTGCTA CTCCAAGAAT TCTCTCAAAA CAAATTAAAA CACAAGCAAA AATTAATGAG
ATTTCAGTTA TTTCAATGGA TGATAAATCT TTATTTGGAG ATATTTTTTA TCAACTTAAT
TTCTCAAAAG CAATTGAAAA GAAACTTTTA TCTGATTATC AAGTTGTAGT GGTTGGAGTT
GATGATCCTA TGGTTCATGA AAAAATAAAC AATCGAGACT TGGTTACAAT ACCTGATGAA
TTAAATACTG ACGCAGAGAC TCTTGCAAGT CATATTGCAC TTGCAAAAGC AACAAAAGAT
CATAAGTTAA ATAGATTAAT TACTTTTCAT AGTCGAATCA ATAGTGCTAG AGAATTTGCA
CATCAGCATA ATAAAATCAT CAATTGGTTA TCACAATTTG AAAATTTTCA AAGTAATAAT
TTTATTACGA ATATTTCGGG AGATATGCCC GCAAAAGAGA GAAATAAACG TATTAACAAA
TTAAAAAATA TAGATGGAAA TGAATTAGGA ATTTTATGTA ATGCAAGGTG CTTATCAGAG
GGTGTTGATG TTCCTAATCT TGATGGAATT GCTTTTATTG ATCCCAGAAA AAGTCAAATT
GATATTATTC AAGCAGTTGG CAGGGCAATT CGGAAAAGTG AAGACAAATC AATTGGAACT
ATCGTCATAC CAGTTTATCT TGCAGATATG GATAAACCAG AAGAAAAAAT ACTTGAATCA
AAATTTAAGG ATGTTTGGCA AATAATTCTT GCTCTTAAAT GTCAAGATGA TTCTCTTCTC
CAAACAATTG ATCTATTACG AGTAAATTTA GGAATCGATC AAAGACAAAC AGGAGGTAAA
AGTGGTTTAG AAAAAATTAT TTTTGATCTA CCTAACAAAA TTAGTAAAAA TTTTGCTAAT
TCTATTCAAA CTTTATTAAT AAGAAATACT TCCGATGATT GGTTAGAAAA ATTTGGAGAA
TATAAGTCTT TTGTAGATAC TAATAATCTC ATGATTGCTA ATAGAGATCC TGCTTTTTTG
AATTGGGTCA AAGATCAAAG AAAATTTAAA AATAAGGGTT TTTTATCCAA AGATCGAATC
AATCTTTTAG ACAGTATAAA TTTTAATTGG AAACCAGATG AAGAGAACTG GGAGAATAAG
TTAAAGCAAT TAAAAGAGTT TAAATTAAAA CATGGGCATG TTATTCCACC CCATAGGAGT
GAAGTTGGTA GATGGTTACA TGGTCAAAAA AAATTATATA AGAACGGAAA ATTGCCAAAA
AAATATATAA ATCTCTTAAA TAATTTGAAT ATTAATTGGG ATATCAAAAT TTCTGAAGGA
TGGGATTCAA ATTTCGAAAA ATTAAAACTA TTCAAGTTAG AGCATGGTCA CTCTAATCCA
CCAAAAGAAC ATTCACTATA TCTTTGGACA ATGTCAGAAA GAAGCAGAAG TAAAGGTAAA
AATTATCCAA AAAAACGTTT GGAATTACTT AGAGATATTG GTTTTGTTTT TGACCTTAGG
AAAGACTATT TCAATCAAAA GATTAAGGAT TTAAAAGAAT TTAAACTTAA ATATGGTCAT
GCAAACCCTC CTCAGAGTGA CGAGGCACTT GGAAAGTGGG TAAATCGTTT GAGGAACGAT
TATAAAAAAA ATAAATTATT GCAATCTGAA ATTAATCTTT TAGAGGAATT AGGATTTGTT
TTTGATACCC AAAAAGAATT TTTAAATCGC AAAATTAAAG ATTTAAGAGA ATTTCAGTCA
AGTAATGGTA ATACATTTCC GCCAAAATAT AGTCCTCTAG GGAAGTGGGT TACAAGACGA
AGATTAGATT ATAAAAATGG GAAATTATCT AAAGAGATAA AAAATCTATT AGAGAGTATT
AGAGGATGGG TTTGGGAAGA AAAAAAATCT CACGAATTCC CTAAAAGAAA ATAA
|
|---|
| Protein sequence | MATFDEFYAS LDPDIGIRGK QFEKFVKWFL KTDPTWASQI DEVWLWNDYP KRWGADCGID
LIFTQKNGKT WAVQSKCVSP NNDIKKSEID SFLSESSDSK IDGRLLIAST DGIGKNAQQV
INRQEKQVVC FLLEQFRQSE IEFPSSMEDL NQGKRKKKKT PRPHQIEAIE KVSERLKTAD
RGQVLMACGT GKTLTSLWIK EKMKAKQVLV LVPSLSLLSQ TLKEWNSEAN HDFKWICVCS
DKSVAKDKKE DEWISNTSEI GVPVTNDPLE IKLFLDESSP KVVFSTYQSA QLIVEAQEHH
DTDDFDLVIA DEAHRCAGKV SDSFGSVLDE RKIKASKRLF FTATPRILSK QIKTQAKINE
ISVISMDDKS LFGDIFYQLN FSKAIEKKLL SDYQVVVVGV DDPMVHEKIN NRDLVTIPDE
LNTDAETLAS HIALAKATKD HKLNRLITFH SRINSAREFA HQHNKIINWL SQFENFQSNN
FITNISGDMP AKERNKRINK LKNIDGNELG ILCNARCLSE GVDVPNLDGI AFIDPRKSQI
DIIQAVGRAI RKSEDKSIGT IVIPVYLADM DKPEEKILES KFKDVWQIIL ALKCQDDSLL
QTIDLLRVNL GIDQRQTGGK SGLEKIIFDL PNKISKNFAN SIQTLLIRNT SDDWLEKFGE
YKSFVDTNNL MIANRDPAFL NWVKDQRKFK NKGFLSKDRI NLLDSINFNW KPDEENWENK
LKQLKEFKLK HGHVIPPHRS EVGRWLHGQK KLYKNGKLPK KYINLLNNLN INWDIKISEG
WDSNFEKLKL FKLEHGHSNP PKEHSLYLWT MSERSRSKGK NYPKKRLELL RDIGFVFDLR
KDYFNQKIKD LKEFKLKYGH ANPPQSDEAL GKWVNRLRND YKKNKLLQSE INLLEELGFV
FDTQKEFLNR KIKDLREFQS SNGNTFPPKY SPLGKWVTRR RLDYKNGKLS KEIKNLLESI
RGWVWEEKKS HEFPKRK
|
|---|
| |