Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_00341 |
Symbol | dhsS |
ID | 4719865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | - |
Start bp | 32651 |
End bp | 33814 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640079695 |
Product | soluble hydrogenase small subunit |
Protein accession | YP_001010350 |
Protein GI | 123965269 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCATAC AACAAAAATT ATCATTGATG ATACCTGGTC CCACACCAGT TCCAGAAAAA GTTTTAGAAG CACTTGGAAG ACATCCCATA GGGCACAGAA GCAAAGATTT TCAAGATCTT GTTGAAATTA CAACCAAGAA TCTACAATGG TTACACCAAA CAAAAAATGA TGTTTTAACA ATAACTGGTA GTGGAACTGC TGCTATGGAA GCAGGAATAA TCAGTACATT GAGCAAAGGA GACAAAGTTA TCTGTGGCGA GAACGGGAAA TTCGGACAAA GATGGGTAAA AGTTGCGCAA GAATTTGGAC TAGAAGTAAT TAAAATTGAT GCAAAATGGG GGAGCCCTCT TGATCCAGAA AATTTCAAAA AGATTTTAGA GAAAGATTAT AAAAAAGAAA TAAAAGCAGT TATCCTCACA CATTCAGAAA CCTCAACAGG AGTAATTAAT GATTTAAAAA CGATAAGTTC GCATATTCGT AATCATAAAA AAGCTTTATC AATTATTGAC TGCGTAACAA GTATTGGAGC TTGTGACGTT CCTGTAGATG AGTGGGAGCT AGATATTGTT GCCTCAGGAT CTCAAAAAGG ATACATGATA CCTCCAGGCT TAAGCTTTGT GTCTATGAGT CAAAAAGCAT GGAAAGCTTC AGAAGCATCT AATTTACCAA AGTTTTATTT AAATTTAAAA TCATATAAAA AAAGTCTTTC AAGTAATAGC AATCCCTATA CTCCAGCAGT TAACTTAGTT TTTGCCTTAA ATGAAGCTTT AAACATGATG AAAGATGAAG GATTAGATTC AATTTTCGCG AGGCATAAAA AACATAGATT AGCTGTTAGT GAGGCAGCTA AAACTCTAAA TCTCCAATTA TTTGCTGATG AGAACCATTT GAGTCCTTCA GTAACTGCAA TACAAATAAA AGATATAGAT GCAGAACAAT TTAGAAAAAC AATAAAAACT AAATATGATA TTTTGCTAGC TGGAGGGCAA GATCATTTAA AAGGTAAAAT CTTTAGGGTG GGTCATCTAG GTTATATCAA CGATCGAGAC GTAATTTCAG TGATAGCAGC AATAGGAAAT ACATTGGTAG AACTAAATAA AATTTCTACC GAACAAGTCG GTGAAGCATT AAAAATAGCT TCATTTCATC TAAAAGTAAC GTAA
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Protein sequence | MAIQQKLSLM IPGPTPVPEK VLEALGRHPI GHRSKDFQDL VEITTKNLQW LHQTKNDVLT ITGSGTAAME AGIISTLSKG DKVICGENGK FGQRWVKVAQ EFGLEVIKID AKWGSPLDPE NFKKILEKDY KKEIKAVILT HSETSTGVIN DLKTISSHIR NHKKALSIID CVTSIGACDV PVDEWELDIV ASGSQKGYMI PPGLSFVSMS QKAWKASEAS NLPKFYLNLK SYKKSLSSNS NPYTPAVNLV FALNEALNMM KDEGLDSIFA RHKKHRLAVS EAAKTLNLQL FADENHLSPS VTAIQIKDID AEQFRKTIKT KYDILLAGGQ DHLKGKIFRV GHLGYINDRD VISVIAAIGN TLVELNKIST EQVGEALKIA SFHLKVT
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