Gene P9515_00271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00271 
SymbolpdxA 
ID4719858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp28329 
End bp29369 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content33% 
IMG OID640079688 
Product4-hydroxythreonine-4-phosphate dehydrogenase 
Protein accessionYP_001010343 
Protein GI123965262 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1995] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA AACGTAATAC TATTGATGAT CGCTTGAAAG TTATTATCAG TGTTGGAGAT 
GATTCAGGTA TTGGACCTGA AATCATATTA AAGGCTCTTA GTTCAAAGGA AATTCCCAAT 
AATATTGATA CATTAATTGT GGGATCAAAA ATAAACTTAA AAAATACGTA TAAAAAACTT 
AAATCTTTAG GAGTACAAAA TATTGTCGAT CCAAGCAATT ATCAAATACA TGATATAGAA 
ATTCCTTTTG AAATTAATAA ACCAAAACAA AGCAATGGAA ATTCAAGTTT TTTTTATTTA 
AAAAAAGCCA TTGAAATTGT CCAAAAATAT CGAAATGCAG CTTTAGTTAC TGGACCTATT 
TGTAAAAAGT CATGGGCTTT GGCAGGTCAT AATTATTCTG GTCAAACTGA GTTATTGGCT 
GAATCTTGTC AGGTAAATAA TTTTGGTATG TTGTTTACCG CTAAATCTCC AATAACTAAT 
TGGAGGTTTA ACACTTTATT AGCGACAACC CATATCCCCC TTTGTGAAGT CCCAAAACAA 
TTGTCAACTA AATTAATTCA TTCAAAATTA AATTTGCTTG CGACATTTTG TAAGAATTAT 
GTTGAAAAAC CGATTCTAAA AATTGCTGGG TTAAATCCAC ATGCCGGTGA AGAAGGAATA 
TTAGGAAGCG AAGAGCATGA TTGGATCAAT GATGCCGTGA ATAGCTGGAG CGAACAAAAC 
AAGGATGTTC ACTTATTAGG TCCAATTTCT CCAGATACTT GCTGGAATTC ATCAGCAAAA 
GCTTGGAGAG AGGATAAAGC TCCAACACAT AATGGAATTC TTGCTATGTA TCATGATCAA 
GGATTAATTC CAATTAAAGT TATAGCTCTT AATTACTCAG TTAACACAAC CCTAGGTTTA 
CCTTTTATTA GAACATCTCC CGATCATGGA ACTGGCTTTG ATATTGCTGG CAAAGGAATA 
GCACAATCTC AAAGTATGGT TGAAGCAATA AAAACAGCTA TTGATTTAAC AAAAGGTTCA 
AGACTGTTTA ACGCGCATTA A
 
Protein sequence
MSNKRNTIDD RLKVIISVGD DSGIGPEIIL KALSSKEIPN NIDTLIVGSK INLKNTYKKL 
KSLGVQNIVD PSNYQIHDIE IPFEINKPKQ SNGNSSFFYL KKAIEIVQKY RNAALVTGPI 
CKKSWALAGH NYSGQTELLA ESCQVNNFGM LFTAKSPITN WRFNTLLATT HIPLCEVPKQ 
LSTKLIHSKL NLLATFCKNY VEKPILKIAG LNPHAGEEGI LGSEEHDWIN DAVNSWSEQN 
KDVHLLGPIS PDTCWNSSAK AWREDKAPTH NGILAMYHDQ GLIPIKVIAL NYSVNTTLGL 
PFIRTSPDHG TGFDIAGKGI AQSQSMVEAI KTAIDLTKGS RLFNAH