Gene P9515_00131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00131 
Symbol 
ID4719844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand- 
Start bp16683 
End bp17687 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content32% 
IMG OID640079674 
ProducttRNA-dihydrouridine synthase A 
Protein accessionYP_001010329 
Protein GI123965248 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID[TIGR00742] tRNA dihydrouridine synthase A 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0398323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGCT ATCTTCCTAA TTCTATAAAT AATTTACACA AAATAAGTGT TGCTCCAATG 
ATGGATTGCA CAGATAAACA CTTTAGGATG ATAATTAGAC AAATAAGCTC TAAAGCTCTT 
TTGTACACGG AAATGATAGT CGCTCAAAGT TTAGTTTATA CCGATAAAAA AGAGAAATTT 
TTAAACTTCA ATAAAGAAGA ACACCCATTA TCAATTCAAT TTGGAGGAGA TAACCCTCAA 
ATGCTTAAAG AGGCAGCAAA AATGGCTCAA GATTGGGGAT ATGATGAAAT TAATTTTAAT 
GTTGGATGTC CAAGTCCAAG AGTTTGTTCG GGAAACTTTG GTGCTTCGCT TATGAAAGAA 
CCTGCTAAAG TAGCAAAATG CATAGAGTCC TTAAAGAATA ACTGCAATTT ACCCATAACC 
ATTAAACATA GAATTGGGGT AGATGAAGAG GATAGTTTTG ATCAATTGAA TACTTTTGTA 
AAAGAAGTTG CTAATGCTGG AGCAGAAAGA TTTACAGTCC ATGCAAGAAA AGCAATTTTG 
AAAGGCCTTA ATCCTAAACA GAATAGAACT ATTCCACCAC TCAGATATGA TGTGGTACAG 
AAATTAAAAG AAAACAATCC TCAGCTGCTC ATAGAAATTA ATGGGGGTTT TACAAATATT 
GATCAATGCA TAAAGGCATT AGAAAGATTA GATGGAGTGA TGATAGGAAG ATCAGTTTAT 
AAATATCCCC TAAGGTGGTC TCAAATCGAC AATAAAATTT ACGGCAAAAA TATTACCAGC 
AAAAGTGCCT CAGAGATTAT ATTTTCACTT ATTCCCTATA TTGAAAATCA TTTACAAAAT 
GGGGGAAAAA CTTGGGATAT TTGCAAACAT CTTATAAATC TAGTTGAAGG AATCCCAAAC 
GCAAAAATTT GGAGAAATCA AATTTCTAGT AGATCAATTA AACAAGAATT AAGTATTGAC 
GCATTAATCA AACTTACTTT AGAGCTTAAA AAATTAGGAT ACTAA
 
Protein sequence
MKSYLPNSIN NLHKISVAPM MDCTDKHFRM IIRQISSKAL LYTEMIVAQS LVYTDKKEKF 
LNFNKEEHPL SIQFGGDNPQ MLKEAAKMAQ DWGYDEINFN VGCPSPRVCS GNFGASLMKE 
PAKVAKCIES LKNNCNLPIT IKHRIGVDEE DSFDQLNTFV KEVANAGAER FTVHARKAIL 
KGLNPKQNRT IPPLRYDVVQ KLKENNPQLL IEINGGFTNI DQCIKALERL DGVMIGRSVY 
KYPLRWSQID NKIYGKNITS KSASEIIFSL IPYIENHLQN GGKTWDICKH LINLVEGIPN 
AKIWRNQISS RSIKQELSID ALIKLTLELK KLGY