Gene P9515_00121 details

Gene Information

• Locus tag: P9515_00121
• ID: 4719843
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 16018
• End bp: 16686
• Gene Length: 669 bp
• Protein Length: 222 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 640079673
• Product: RNA recognition motif-containing protein
• Protein accession: YP_001010328
• Protein GI: 123965247
• COG category: [R] General function prediction only
• COG ID: [COG0724] RNA-binding proteins (RRM domain)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.239184
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTATTT TTGTTGGCAA TTTGCCTTTC CGCGCAGAGC GAGAAGACAT CCTAGAGTTA 
TTTACACCAT ATGGTGAAGT TATGAATTGT TCTCTCCCAT TAGAGAGAGA TACTGGTAGA 
AAAAGAGGTT TTGCTTTTGT CGAAATGGCA GATGAAGCAC TTGAGACAAC CGCTATTGAA 
GGACTTCAAG GGACTGAGCT CATGGGAAGA CCCTTAAGAA TAAACAAAGC AGAGCCAAGA 
GGCGGCGGCG GCCAAAGAAG AGGCGGCGGC GGCGGTAGAG GCGGCGGTTA CGGCGGCGGT 
GGTAATGGCG GCGGTTACGG CGGCGGTGGT AATGGCGGCG GTTACGGCGG TGGCGGTAAT 
GGCGGTGGTT ACGGCGGCGG TGGTAATGGC GGCGGTTACG GCGGCGGTGG TAATGGCGGC 
GGTTACGGCG GTGGCGGTAA TGGCGGTGGT TACGGCGGCG GCGGTAATGG CGGTGGTTAC 
GGCGGCGGTG GTTACGGCGG TGGTTACTCT GAACCTGCTT CAAATTACGC TAATAAATCT 
TCAGGGGCTG AAGGCTGGGA AGATAGAAGT TATGGAAACT CATCTGAAAA TTCTGAATTT 
GAAAATGGTA GAAGTAGAAG AAAAAGAAGT GTTATAAATA ATTCTGAAAT TTCTCAGGAA 
GGTAATTAG 

 

Protein sequence

MSIFVGNLPF RAEREDILEL FTPYGEVMNC SLPLERDTGR KRGFAFVEMA DEALETTAIE 
GLQGTELMGR PLRINKAEPR GGGGQRRGGG GGRGGGYGGG GNGGGYGGGG NGGGYGGGGN 
GGGYGGGGNG GGYGGGGNGG GYGGGGNGGG YGGGGNGGGY GGGGYGGGYS EPASNYANKS 
SGAEGWEDRS YGNSSENSEF ENGRSRRKRS VINNSEISQE GN