| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_00101 |
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| Symbol | rsbU |
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| ID | 4719841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9515 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008817 |
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| Strand | + |
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| Start bp | 13190 |
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| End bp | 14461 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 640079671 |
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| Product | protein phosphatase 2C domain-containing protein |
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| Protein accession | YP_001010326 |
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| Protein GI | 123965245 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.43645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGCCAATTG ATAAGAATGA TAAATTTGTA GAAATAGCAT CTTCTTTAGC TTATTATTTA
AAATCTTTTT CCAACATTAA AAGATTTCTA GATTATATCT CTTTAATTTT AAAGCACATT
TTTAATGAGC AATTAAGTTT AATTATTCCT TTAAATGAAA AAGGAGAAAT ATGGAAAGAA
AATATCAAGT TTTCTGGAGA TACAAAAAAT TTTAAAATCG ATAGTGAAAT TAAAAGTTAT
TTAAAAAATT TTGATTTTTC AAAAAATTTC AGATTCAAAG AAATTGATTC CCTTGAAAAA
ATTTTTAATA ATAAATTTAA AGAATATGTA ATTAAATCAC ATAAAATATT GTCTCGAGGA
AAATGCAGGG GATTTCTTTA TACCTTTAAT TATGGAATTT ATGATGAATC TCTAATAAAT
GAACGTAATT TAAAGTTTAT TATTAGTTGT TTAGCGGTTG GTTTAGAAAA CTATTGGTTA
TTAAAAACAA AAAAAAAGCA TGAAAATGTG GATAGAGAAA TTTCAATAGG AGCAGAAATT
CAATCACAAC TCTTACCGGA TTATTGCCCA ATTATTTTTG GGGTGGATTT AGCGGCTCAC
TGCAGACCAG CTCTTCAACT GGGAGGAGAT TATTATGATT TTATGTCTTT AAAAACAAAT
ATCTCTGAAA AGAGAAGGGA GAAGGCAAGA TGGGCACTGG TTATTGGTGA CGTAATGGGG
AAGGGAATTC CTGCAGGTCT TTTGATGACT ATGTTAAGAG GAATGCTAAG AGCAGAGGTT
TTAACTGGTC TGCCTCCAGA TAGAATTTTG CATGATTTAA ATCAGTTAGC TATTTATGAT
TTAGACCAAT CCCATAGATT TGTTACTTTA TTTTATTCAG ATTATGATCC AAGAACAAGA
AAATTAAGGT ATGCAAATGC TGCACATAAT CCTCCTTTGC TTTGGAAAAG TTCTGAGCAA
AAAATTATAA AGTTGGACTC TGAAGGTTTC GTTTTAGGAT TACAAAATGA TGCGGAATAT
CAATGTGGTC AAATACAACT TAGTAAAAAT GACGCAATTC TTTACTATAC AGATGGAGTA
ACTGAGACTT CTAATGCTTT AGGGGAAAGA TTTGATGAAG AACGATTAAT GAAATCTTTT
TCAAAATTAT GTAAGCAATC ACTTAAATCT AAAGAGATTT TACATAAGAT TTTTAAAATA
TTAGATGAAT TTACTGGTAA AAATAGACAA TTAGAAGATG ATGCTTCAAT CGTAGTCTTT
CAGTTAGATT AG
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| Protein sequence | MPIDKNDKFV EIASSLAYYL KSFSNIKRFL DYISLILKHI FNEQLSLIIP LNEKGEIWKE
NIKFSGDTKN FKIDSEIKSY LKNFDFSKNF RFKEIDSLEK IFNNKFKEYV IKSHKILSRG
KCRGFLYTFN YGIYDESLIN ERNLKFIISC LAVGLENYWL LKTKKKHENV DREISIGAEI
QSQLLPDYCP IIFGVDLAAH CRPALQLGGD YYDFMSLKTN ISEKRREKAR WALVIGDVMG
KGIPAGLLMT MLRGMLRAEV LTGLPPDRIL HDLNQLAIYD LDQSHRFVTL FYSDYDPRTR
KLRYANAAHN PPLLWKSSEQ KIIKLDSEGF VLGLQNDAEY QCGQIQLSKN DAILYYTDGV
TETSNALGER FDEERLMKSF SKLCKQSLKS KEILHKIFKI LDEFTGKNRQ LEDDASIVVF
QLD
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