Gene P9515_00101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00101 
SymbolrsbU 
ID4719841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp13190 
End bp14461 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content29% 
IMG OID640079671 
Productprotein phosphatase 2C domain-containing protein 
Protein accessionYP_001010326 
Protein GI123965245 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.43645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCAATTG ATAAGAATGA TAAATTTGTA GAAATAGCAT CTTCTTTAGC TTATTATTTA 
AAATCTTTTT CCAACATTAA AAGATTTCTA GATTATATCT CTTTAATTTT AAAGCACATT
TTTAATGAGC AATTAAGTTT AATTATTCCT TTAAATGAAA AAGGAGAAAT ATGGAAAGAA
AATATCAAGT TTTCTGGAGA TACAAAAAAT TTTAAAATCG ATAGTGAAAT TAAAAGTTAT
TTAAAAAATT TTGATTTTTC AAAAAATTTC AGATTCAAAG AAATTGATTC CCTTGAAAAA
ATTTTTAATA ATAAATTTAA AGAATATGTA ATTAAATCAC ATAAAATATT GTCTCGAGGA
AAATGCAGGG GATTTCTTTA TACCTTTAAT TATGGAATTT ATGATGAATC TCTAATAAAT
GAACGTAATT TAAAGTTTAT TATTAGTTGT TTAGCGGTTG GTTTAGAAAA CTATTGGTTA
TTAAAAACAA AAAAAAAGCA TGAAAATGTG GATAGAGAAA TTTCAATAGG AGCAGAAATT
CAATCACAAC TCTTACCGGA TTATTGCCCA ATTATTTTTG GGGTGGATTT AGCGGCTCAC
TGCAGACCAG CTCTTCAACT GGGAGGAGAT TATTATGATT TTATGTCTTT AAAAACAAAT
ATCTCTGAAA AGAGAAGGGA GAAGGCAAGA TGGGCACTGG TTATTGGTGA CGTAATGGGG
AAGGGAATTC CTGCAGGTCT TTTGATGACT ATGTTAAGAG GAATGCTAAG AGCAGAGGTT
TTAACTGGTC TGCCTCCAGA TAGAATTTTG CATGATTTAA ATCAGTTAGC TATTTATGAT
TTAGACCAAT CCCATAGATT TGTTACTTTA TTTTATTCAG ATTATGATCC AAGAACAAGA
AAATTAAGGT ATGCAAATGC TGCACATAAT CCTCCTTTGC TTTGGAAAAG TTCTGAGCAA
AAAATTATAA AGTTGGACTC TGAAGGTTTC GTTTTAGGAT TACAAAATGA TGCGGAATAT
CAATGTGGTC AAATACAACT TAGTAAAAAT GACGCAATTC TTTACTATAC AGATGGAGTA
ACTGAGACTT CTAATGCTTT AGGGGAAAGA TTTGATGAAG AACGATTAAT GAAATCTTTT
TCAAAATTAT GTAAGCAATC ACTTAAATCT AAAGAGATTT TACATAAGAT TTTTAAAATA
TTAGATGAAT TTACTGGTAA AAATAGACAA TTAGAAGATG ATGCTTCAAT CGTAGTCTTT
CAGTTAGATT AG
 
Protein sequence
MPIDKNDKFV EIASSLAYYL KSFSNIKRFL DYISLILKHI FNEQLSLIIP LNEKGEIWKE 
NIKFSGDTKN FKIDSEIKSY LKNFDFSKNF RFKEIDSLEK IFNNKFKEYV IKSHKILSRG
KCRGFLYTFN YGIYDESLIN ERNLKFIISC LAVGLENYWL LKTKKKHENV DREISIGAEI
QSQLLPDYCP IIFGVDLAAH CRPALQLGGD YYDFMSLKTN ISEKRREKAR WALVIGDVMG
KGIPAGLLMT MLRGMLRAEV LTGLPPDRIL HDLNQLAIYD LDQSHRFVTL FYSDYDPRTR
KLRYANAAHN PPLLWKSSEQ KIIKLDSEGF VLGLQNDAEY QCGQIQLSKN DAILYYTDGV
TETSNALGER FDEERLMKSF SKLCKQSLKS KEILHKIFKI LDEFTGKNRQ LEDDASIVVF
QLD