Gene P9515_00081 details

Gene Information

• Locus tag: P9515_00081
• Symbol: nusB
• ID: 4719839
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9515
• Kingdom: Bacteria
• Replicon accession: NC_008817
• Strand: +
• Start bp: 11114
• End bp: 11740
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640079669
• Product: transcription antitermination protein NusB
• Protein accession: YP_001010324
• Protein GI: 123965243
• COG category: [K] Transcription
• COG ID: [COG0781] Transcription termination factor
• TIGRFAM ID: [TIGR01951] transcription antitermination factor NusB

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.339041
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCATAATA GATCGCTATC ACGAGAATTA GCCTTACTTT CGTTAGGTAT TATTAAAGAC 
AAAGGAGATT TAGTATTAAG TAATTGTCAA ATTGAAGAAA TTTTTGAATC AGCTTTAGAT 
TCTTTAATTA ATCACTGTAG AGACGAGTTA GATGATTGTG AAGCAGATTT AGAAAACGTC 
TCGCAAAATC TTTTAGATAG TGAATTAAAA GAAGGTAGTG ATTCTTCTTT TGCAAATGTA 
CGGGATGAAC TTAAAAAAGC TTTTCATAAA ATTGAATCTG TAATGAATTC ACTTTCAGTT 
ACTTTAGATT TTCCGAAATT GGTTGTTTCA AGTAATCAAA ACGATATTAG AGAAGATGTA 
AATCATAGGA TTAAAAGTAT AATTGATAAT TTACAAACAA TCGATTCTGA AATTGATGAA 
GTGATGGATG GATGGAGATT AAAAAGATTG CCTAGAATTG ATCGTGACAT TTTACGCTTA 
GCTTATATCG ATATTCATTT GCTTGATACT CCTATTGCAG TAGCGTGCGA TGAGGCTGTA 
AATTTAGCAA ATAAATATAG TGATACTCAA GGTAGAAAAA TGATTAATGG GGTTTTAAGG 
AGATTGCAAA AAGTGAAGGT GAAATAA 

 

Protein sequence

MHNRSLSREL ALLSLGIIKD KGDLVLSNCQ IEEIFESALD SLINHCRDEL DDCEADLENV 
SQNLLDSELK EGSDSSFANV RDELKKAFHK IESVMNSLSV TLDFPKLVVS SNQNDIREDV 
NHRIKSIIDN LQTIDSEIDE VMDGWRLKRL PRIDRDILRL AYIDIHLLDT PIAVACDEAV 
NLANKYSDTQ GRKMINGVLR RLQKVKVK