Gene P9515_00051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9515_00051 
Symbol 
ID4719836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9515 
KingdomBacteria 
Replicon accessionNC_008817 
Strand
Start bp8421 
End bp9275 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content26% 
IMG OID640079666 
ProductTPR-repeat pilus assembly protein TadD 
Protein accessionYP_001010321 
Protein GI123965240 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.668643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAAT CTTTCATAAA ATTATTATTT TTTTCAATAA TAAGTTGCCA CATTTTTAAT 
ACCCAAAATT TAAGAGCTTT AGTCCCGTAT TATCATTTCC CTGATGCAAA ACATCTAGAA
CAAGAAGCTT TATCAATTGG CAAACAGGCA TATCAACTTT TATATTTTGG TCAAATCAAA
GATAGTCTTA ATTTTGCAAA ATTAGCTGTC AAGATAAATG ATAAAAATGA AAATTTATGG
TTGATTCTTG CTGAAGCACA AACAGCAAAC GAATTGTATG AAGACGCTTT TAATTCACTA
AATAATGCTC AAAAAATTAA TCCTAAAATG AGTGAAATAT ATTTCGCAAA AAGCGCTATA
TATTTAAAAC AAGCAAAAAT TAAAAAAGCA AAAATTTCTT TAGAATTAGG TATTCAAATC
GCACCCGAAA ACTTTAACGC CATTTTTCAA TTAGGAAACA TATATTTGAT GGAAAAAGAT
TATGAAAAAG CTTTAAAAGA ATTTGACAAA GCAATTGAAA TTAAAAAAGA TTTTTGGCAA
GCGATTAATA ATAAAGGACT AGCATATTAT GAATTGAATA ATATAAATCT TTCTATTATC
TCTTTCAAAA AAGCTATATC TATAGAAGAA AACGCAGAAC CACTATTAGC ACTTGCATCA
TGCTTAAGTA TTAAAGATAT TAATGAAGCA ATTTTTCTCG CAAAAAAAGC TTTAATAAAA
GAACCTAATT ACGTTAAATA TAACTATAGA AAAGAACAGC TTTGGGGTGA AAAACTACAA
AACTCTACTG AAAAACTGTT TGAAAATAAC AAACTTAAAG AAGAAATATT TATTGCAAGA
ACAAAAATAA ATTAA
 
Protein sequence
MQKSFIKLLF FSIISCHIFN TQNLRALVPY YHFPDAKHLE QEALSIGKQA YQLLYFGQIK 
DSLNFAKLAV KINDKNENLW LILAEAQTAN ELYEDAFNSL NNAQKINPKM SEIYFAKSAI
YLKQAKIKKA KISLELGIQI APENFNAIFQ LGNIYLMEKD YEKALKEFDK AIEIKKDFWQ
AINNKGLAYY ELNNINLSII SFKKAISIEE NAEPLLALAS CLSIKDINEA IFLAKKALIK
EPNYVKYNYR KEQLWGEKLQ NSTEKLFENN KLKEEIFIAR TKIN