| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9515_00041 |
|---|
| Symbol | |
|---|
| ID | 4719835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9515 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008817 |
|---|
| Strand | - |
|---|
| Start bp | 5892 |
|---|
| End bp | 8333 |
|---|
| Gene Length | 2442 bp |
|---|
| Protein Length | 813 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 640079665 |
|---|
| Product | DNA gyrase/topoisomerase IV, subunit A |
|---|
| Protein accession | YP_001010320 |
|---|
| Protein GI | 123965239 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.768882 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAAGG AAAAATTCAC TTCCATTTCG CTGCAAGAAG AAATGCAACG TTCCTATCTA
GAGTATGCGA TGAGCGTGAT AGTAGGACGT GCATTACCTG ATGCTAGAGA TGGCTTGAAA
CCAGTCCAAA GAAGGATCCT TTTCGCAATG CATGAATTAG GACTTACTCC AGATAGACCA
TTTAGGAAAT GTGCCAGAGT TGTTGGAGAT GTACTAGGAA AATATCATCC TCATGGAGAT
CAAGCAGTTT ATGAAGCCTT AGTTAGGTTG GTTCAAGATT TTTCAACAAA ATATCCCACT
CTTGATGGTC ATGGGAATTT TGGATCAGTT GACAATGATC CACCAGCTGC AATGAGATAT
ACCGAAACAC GTCTGGCACC AATAGCTCAT GAGTGTTTTC TTCAAGAAAT TGAAACTGAT
ACAGTTAGTT ACTCAAATAA CTTTGATGGC TCACAAAAAG AACCAGATAT ATTACCTGCC
CAATTACCAT TCTTATTATT AAATGGATCA TCGGGCATTG CCGTTGGGAT GGCTACAAAT
ATTCCTCCAC ACAATTTGGG TGAAATTATT GATGGTTTAA TTGCACTAAT AAGAGATAAA
GATATTAGCG ACTCAAAATT ATCTAAAATC ATATTAGGAC CTGATTTTCC TACAGGAGGA
GAATTACTTT ACAATAATGG AATTAAAAAT GTTTACCTAG AGGGAAGAGG ATCCATAACA
ATACGAGGTG TTATTAAAAG TGAAGAAATT AATTTAGGGA AAGGAAAGCA TAAAAGAAAT
GCGCTAATAA TATCAGAACT TCCTTACCAA ATTAGTAAAG CCGGTTGGAT TGAAAAACTT
GCTGAATTAG TAAATATTGG AAAGATTGAT GGAATATCTG ATATTAGGGA TGAAAGTGAT
AGAGATGGAA TGAGAATAGT TATTGAATTA AAAAAAGATT CTAATCCTGA AATTGTAATA
TCAAACTTAT ACAAAAAAAC AACATTACAA TCAAATTTCG GAGCAATATT ATTAGCTTTA
GTAAACGGCA AACCCGTACA ACTTACCCTA AGAAAATATT TAAATTATTT TCTAGAATTT
AGAGAAGAAA CAATTAGAAA AAGAACAAAA TATTTTCTAA AAATTGCATC AGAAAAACTT
GAAATATTAG AAGGATTTTC AATAGCAACT AAAAATATAA AAAATATAAT TGAGATTATT
CAAAACTCAG AAAATGTTTC TGAGGCGAAA TCAATTTTAA TACCAAAGCT TGACCTCAGT
AATAAACAAG CAGATGCAGT CTTAAGCATG CCGCTTAAAA AATTGACAAA TTTAGAAAAA
AAACAGGTAG AGAATGAAAT TAATCAACTT TTTGAGAAAA AGAAATATCT TAGTACTCTT
CTAAATAATA GAAGTTTATT ACTTGAAACT TTAATTAAAG AGCTAATTGA ATTAAAGAAA
AAATTTAATG TAAAAAGAAA AACAAAAATT TTAAAAGATA TTAATCAATC TGAAGAATTA
GATACTATTA ATAATCAAAT ATTAGAAGAT CTTATAATTA AAGACGCAAA AATATCAATA
GATAATAGAT TTTATTTTAA AAAATTAATT TACTATAATT ACAAAAAATT ATTAGATCAA
GAAAATAAAT TTATTGAAAA TAAAAATGTT CAAAAATTCA TATGTAATAT TAAAAAGAGT
TTAAGAATCA TAGGAGTAAC CTCTTCGGGT AAAGTTCTTC AAATAAATTG GAAATCTATA
ATTAATAATG TCTATAAATT AGATAACAAA ATTTTAGGAA ATATAAATCC AAAAGAAATT
ATAAATTTTC ATGATTTAGA CAGTAACTTA GAAAATTATA TTTGCATTAT ATGTTCAGAT
GGAAAATTTA AAAAAGTTTT ATTAGATAAA GATATGATTA GAAGTACTAG AATATTTTCC
ATTACAAAGT TGAAAAATTC TACAAAAATT ATTGATTCAT TTATTTATAG CCAAGAAGAA
AATATAATAA TACTTACTTC TATTGGTAGA ATTTTTAAAT TTAATTTATC TAATGAATAT
TTAAAGCCAA GTAGCAAACA ATCACAGGGA ATATTATTAG TAAATCTATT ACCTAAAGAA
CAAATAGTTT CTTGCTGTAA AAGTAAAGAG AAAGATTTAC TTTATTTGAT ATCAAATAAA
GGCAAATTTT TTGAATTGAA AATTAACGAA GTTTATAATT CTTATAATTC AAAATTAGGA
TATATTAACG AAAAAATTCA ACTTAATAAT GATCATTTTA TAAAAGTTCT AACAAATAAT
CAATATATCG ATTTTGAGAC AAATAAAAAT AAATCTGCAA GAATAAATTT AACCAAATTT
TCTTCTAAAC CTAATAAAAA TATACTTAAT GTTGATTTTC TCAATTTAGA AAAAGATGAA
TTTCTTGAAA ATTGTTCCAG TCTAGATAAT CTTTTAAATT AA
|
|---|
| Protein sequence | MTKEKFTSIS LQEEMQRSYL EYAMSVIVGR ALPDARDGLK PVQRRILFAM HELGLTPDRP
FRKCARVVGD VLGKYHPHGD QAVYEALVRL VQDFSTKYPT LDGHGNFGSV DNDPPAAMRY
TETRLAPIAH ECFLQEIETD TVSYSNNFDG SQKEPDILPA QLPFLLLNGS SGIAVGMATN
IPPHNLGEII DGLIALIRDK DISDSKLSKI ILGPDFPTGG ELLYNNGIKN VYLEGRGSIT
IRGVIKSEEI NLGKGKHKRN ALIISELPYQ ISKAGWIEKL AELVNIGKID GISDIRDESD
RDGMRIVIEL KKDSNPEIVI SNLYKKTTLQ SNFGAILLAL VNGKPVQLTL RKYLNYFLEF
REETIRKRTK YFLKIASEKL EILEGFSIAT KNIKNIIEII QNSENVSEAK SILIPKLDLS
NKQADAVLSM PLKKLTNLEK KQVENEINQL FEKKKYLSTL LNNRSLLLET LIKELIELKK
KFNVKRKTKI LKDINQSEEL DTINNQILED LIIKDAKISI DNRFYFKKLI YYNYKKLLDQ
ENKFIENKNV QKFICNIKKS LRIIGVTSSG KVLQINWKSI INNVYKLDNK ILGNINPKEI
INFHDLDSNL ENYICIICSD GKFKKVLLDK DMIRSTRIFS ITKLKNSTKI IDSFIYSQEE
NIIILTSIGR IFKFNLSNEY LKPSSKQSQG ILLVNLLPKE QIVSCCKSKE KDLLYLISNK
GKFFELKINE VYNSYNSKLG YINEKIQLNN DHFIKVLTNN QYIDFETNKN KSARINLTKF
SSKPNKNILN VDFLNLEKDE FLENCSSLDN LLN
|
|---|
| |