Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9515_00001 |
Symbol | dnaN |
ID | 4720479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9515 |
Kingdom | Bacteria |
Replicon accession | NC_008817 |
Strand | + |
Start bp | 171 |
End bp | 1328 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640079661 |
Product | DNA polymerase III subunit beta |
Protein accession | YP_001010316 |
Protein GI | 123965235 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.354313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGATTG TTTGCAATCA AAATGAATTT AATTATGCAA TTCAATTAGT TAGTAAGGCA GTTTCCTCAA GACCCACTCA TCCAATTCTT GCAAACTTAC TTCTGACAGC TGATCAAGGA ACTAACAAAA TTAGTTTAAC TGGATTTGAT TTAAATTTAG GAATACAAAC TTCATTTGAT GCGACTGTCA AAAAAAGCGG CGCAATTACT ATTCCCTCAA AACTTTTAGC TGAAATTGTT AATAAGTTAC CAAGTGAAAC TCCTGTTTCT CTTGATGTCG ATGATAGCTC TGATAATATT TTAATCAAAA GTGATAGGGG TTCTTTTAAC ATAAAAGGTA TTCCATCAGA CGATTATCCA AATTTACCTT TTGTAGAAAG TGGGACATCT TTGAATATCG ATCCAAGTTC TTTTTTAAAA GCTTTAAAGT TAACTATATT TGCTAGTAGT AGTGATGATT CCAAACAATT ACTCACTGGT GTTAATTTTA CATTTAATTT GAAATTTCTT GAGTCAGCTG CAACAGATGG CCATAGATTA GCAGTTGTTT TAGTTGACAA AAAAGAAAAT TTTGATGAAG TAGCAGATCT TTCTTCTAAT GAAGATAACT TATCAGTAAC TATACCAACA AGATCTTTAA GAGAAATTGA AAAGCTTGTT AGTCTCAGAA CTTCAGAAAA TTCAATTAAG CTTTTTTATG ATAAAGGTCA AGTTGTATTT ATTTCTTCTA ATCAAATAAT TACTACAAGA ACTCTTGAAG GTTCTTATCC AAATTATTCT CAATTAATAC CGGATGATTT CTCTAAACTT TTTACATTTA ATACAAAAAT ATTAATTGAT TCTCTCGAAA GAATAGCTGT ATTAGCCGAT CAACAAAGTA GTGTTGTTAA AATTAAATTA GAAGAAAAGG GTTTGGCATT AATAAGTGCT GATGCTCAAG ATATAGGCAA TGCAAGTGAA ATAGTTCCAG TATCCTATGA TTTCGATCAG TTTGATATCG CTTTTAATGT AAGGTATCTC TTAGAAGGTC TAAAAGTTAT TTCAAGTGAA AATGTTCTTT TTAAATGTAA TCTTTCTACT ACTCCTGCTG TTTTAGTACC AGAAGATAAT ATTAGTTCTT TTACTTATTT AGTTATGCCT GTTCAAGTTC GTTCCTAA
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Protein sequence | MEIVCNQNEF NYAIQLVSKA VSSRPTHPIL ANLLLTADQG TNKISLTGFD LNLGIQTSFD ATVKKSGAIT IPSKLLAEIV NKLPSETPVS LDVDDSSDNI LIKSDRGSFN IKGIPSDDYP NLPFVESGTS LNIDPSSFLK ALKLTIFASS SDDSKQLLTG VNFTFNLKFL ESAATDGHRL AVVLVDKKEN FDEVADLSSN EDNLSVTIPT RSLREIEKLV SLRTSENSIK LFYDKGQVVF ISSNQIITTR TLEGSYPNYS QLIPDDFSKL FTFNTKILID SLERIAVLAD QQSSVVKIKL EEKGLALISA DAQDIGNASE IVPVSYDFDQ FDIAFNVRYL LEGLKVISSE NVLFKCNLST TPAVLVPEDN ISSFTYLVMP VQVRS
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