Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_19151 |
Symbol | aroE |
ID | 4718654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1655401 |
End bp | 1656261 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640079650 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001010305 |
Protein GI | 123969447 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTCAA GTAAGACATC TTTCATCGCA TTAATTGGCA ATCCAGTAAG CCATTCTTTG TCTCCAATTA TGCAAAATGC TGCCCTTCAA TATTTAGGCT TAGATTTAAT CTATATTGCT GTACCCTGCA AAGATGAAGA TCTAGAATTA GTTCTTAATT CTTTTAAAAA GATTAATTGC AAAGGTTTAA ACATTACAAT TCCACACAAA GAAAAAGTAT TAACCCTTTG TAGTGAAATC TCCCCTATTG CTAACAAACT TAAAGCAATT AATACCCTGA AATTAAATTC TGAAAAAAAA TGGAGCGCAA CTAATACCGA TGTAGAGGGA TTTATTTATC CATTAAAAAA TTTAAACTTA GCAAAGAAAA AATCAATAGT TCTTGGCTCC GGGGGTGCAG CAAGATCTGT TATTCAAGGT TTAATAAATT TAAATCTTTC AACAATTTCA GTAATATCAC GTAACAAATC ATCACTGGAT GAATTAATTA AAAACTTTGG TAATGAAATT CAACTACAGG GTTTATTGAA TAGTGATGAT CAAGCCCAAG TTTTAATTCG GGAAGCAGAT TTGATTGTAA ATACAACACC AGCAGGGATG AAAACAACTA AATATAAAAA TAATGTAATG CCATATGGCG AAACATTTTG GAGATCTCTT AACTCGCAAA CAATTGTTTA CGATTTAATA TACAATCCTG CTCCAACTAC TTTATTGAAA TTTAGTGCTA GAAAAGGATG CAAGACTATA GATGGTTTGG AAATGCTTGT TGCCCAAGGA ATAAAATCAT TATCATTTTG GACAGATGGT TTAGAAGTAC CTTTTCATGT AATGAATGAC GCACTAAAAA AATATCTTTA A
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Protein sequence | MISSKTSFIA LIGNPVSHSL SPIMQNAALQ YLGLDLIYIA VPCKDEDLEL VLNSFKKINC KGLNITIPHK EKVLTLCSEI SPIANKLKAI NTLKLNSEKK WSATNTDVEG FIYPLKNLNL AKKKSIVLGS GGAARSVIQG LINLNLSTIS VISRNKSSLD ELIKNFGNEI QLQGLLNSDD QAQVLIREAD LIVNTTPAGM KTTKYKNNVM PYGETFWRSL NSQTIVYDLI YNPAPTTLLK FSARKGCKTI DGLEMLVAQG IKSLSFWTDG LEVPFHVMND ALKKYL
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