Gene A9601_19151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_19151 
SymbolaroE 
ID4718654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1655401 
End bp1656261 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content31% 
IMG OID640079650 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001010305 
Protein GI123969447 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTCAA GTAAGACATC TTTCATCGCA TTAATTGGCA ATCCAGTAAG CCATTCTTTG 
TCTCCAATTA TGCAAAATGC TGCCCTTCAA TATTTAGGCT TAGATTTAAT CTATATTGCT
GTACCCTGCA AAGATGAAGA TCTAGAATTA GTTCTTAATT CTTTTAAAAA GATTAATTGC
AAAGGTTTAA ACATTACAAT TCCACACAAA GAAAAAGTAT TAACCCTTTG TAGTGAAATC
TCCCCTATTG CTAACAAACT TAAAGCAATT AATACCCTGA AATTAAATTC TGAAAAAAAA
TGGAGCGCAA CTAATACCGA TGTAGAGGGA TTTATTTATC CATTAAAAAA TTTAAACTTA
GCAAAGAAAA AATCAATAGT TCTTGGCTCC GGGGGTGCAG CAAGATCTGT TATTCAAGGT
TTAATAAATT TAAATCTTTC AACAATTTCA GTAATATCAC GTAACAAATC ATCACTGGAT
GAATTAATTA AAAACTTTGG TAATGAAATT CAACTACAGG GTTTATTGAA TAGTGATGAT
CAAGCCCAAG TTTTAATTCG GGAAGCAGAT TTGATTGTAA ATACAACACC AGCAGGGATG
AAAACAACTA AATATAAAAA TAATGTAATG CCATATGGCG AAACATTTTG GAGATCTCTT
AACTCGCAAA CAATTGTTTA CGATTTAATA TACAATCCTG CTCCAACTAC TTTATTGAAA
TTTAGTGCTA GAAAAGGATG CAAGACTATA GATGGTTTGG AAATGCTTGT TGCCCAAGGA
ATAAAATCAT TATCATTTTG GACAGATGGT TTAGAAGTAC CTTTTCATGT AATGAATGAC
GCACTAAAAA AATATCTTTA A
 
Protein sequence
MISSKTSFIA LIGNPVSHSL SPIMQNAALQ YLGLDLIYIA VPCKDEDLEL VLNSFKKINC 
KGLNITIPHK EKVLTLCSEI SPIANKLKAI NTLKLNSEKK WSATNTDVEG FIYPLKNLNL
AKKKSIVLGS GGAARSVIQG LINLNLSTIS VISRNKSSLD ELIKNFGNEI QLQGLLNSDD
QAQVLIREAD LIVNTTPAGM KTTKYKNNVM PYGETFWRSL NSQTIVYDLI YNPAPTTLLK
FSARKGCKTI DGLEMLVAQG IKSLSFWTDG LEVPFHVMND ALKKYL