| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_19071 |
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| Symbol | |
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| ID | 4718646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 1644619 |
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| End bp | 1645638 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640079642 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001010297 |
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| Protein GI | 123969439 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGATCC CTCTGGAATC TGCGAAAAGC TCTTCAGATA ATAATTTTGA TGAGCCAAGA
TTACCAAACA CTGCGGGCAA ATCTCGCAAA TCGAAATCCA GTCTTACGGC AAAACAAAGC
CAAAAAAAAT CTGGCAGACT CGCTTCAGAT TCTATTGGCT ATTACTTAAG TAGCATTGGA
AGAGTACCTC TTTTGACTCC AGCAGAGGAA ATAGAGTTAG CTCATCATGT TCAGAACATG
AAAAAGTTGC TACAAATTCC TGAAACTGAT AGAACCCAAC GAAATCTTTA TCAAATTAAG
ATTGGCAAAA GAGCAAGAGA TAGAATGATG GCAGCTAATC TAAGGCTCGT TGTCTCAGTT
GCAAAAAAAT ACCAAAACCA AGGGCTTGAA TTATTAGATC TTGTCCAGGA AGGAGCTATT
GGACTTGAAA GAGCCGTAGA TAAATTTGAT CCTGCTATGG GATATAAATT CTCAACTTAT
GCTTACTGGT GGATTAGACA AGGAATGACG AGGGCAATTG ATAACAGTGC TAGAACCATT
CGTTTGCCTA TTCACATAAG TGAAAAACTA TCCAAAATGA GAAGAGTCTC CAGAGAATTA
TCACACAAAT TTGGCAGACA ACCTACAAGA TTGGAAATGG CAACTGAGAT GGGAATTGAT
CAAAAAGATT TAGAAGATTT AATTTCTCAA AGTGCTCCTT GCGCCTCCCT AGATGCACAT
GCAAGAGGGG AAGAAGACAG AAGTACACTT GGTGAACTCA TACCTGATCC AAACTGTGAA
GAGCCTATGG AAGGTATGGA TAGAACTATT CAAAAAGAGC ATTTAGGAAC TTGGCTTTCT
CAATTAAATG AAAGAGAGCA AAAAATCATG AAGCTCAGAT TTGGGCTAGA TGGTGAAGAA
CCATTAACAC TCGCAGAAAT AGGAAGACAA ATTAATGTTT CGCGAGAAAG AGTAAGGCAA
CTAGAAGCTA AAGCAATATT AAAGCTTCGA GTAATGACAA CTCATCAAAA AGCAGCTTAA
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| Protein sequence | MGIPLESAKS SSDNNFDEPR LPNTAGKSRK SKSSLTAKQS QKKSGRLASD SIGYYLSSIG
RVPLLTPAEE IELAHHVQNM KKLLQIPETD RTQRNLYQIK IGKRARDRMM AANLRLVVSV
AKKYQNQGLE LLDLVQEGAI GLERAVDKFD PAMGYKFSTY AYWWIRQGMT RAIDNSARTI
RLPIHISEKL SKMRRVSREL SHKFGRQPTR LEMATEMGID QKDLEDLISQ SAPCASLDAH
ARGEEDRSTL GELIPDPNCE EPMEGMDRTI QKEHLGTWLS QLNEREQKIM KLRFGLDGEE
PLTLAEIGRQ INVSRERVRQ LEAKAILKLR VMTTHQKAA
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