| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_18971 |
|---|
| Symbol | gcvT |
|---|
| ID | 4718636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 1632069 |
|---|
| End bp | 1633181 |
|---|
| Gene Length | 1113 bp |
|---|
| Protein Length | 370 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640079632 |
|---|
| Product | glycine cleavage system aminomethyltransferase T |
|---|
| Protein accession | YP_001010287 |
|---|
| Protein GI | 123969429 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
|---|
| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTGC TAAAAAGTCC TCTTTATTCA AAATATGTTG AATCCAATGC AAAATTAGTG
GATTTTGCAG GTTGGGAAAT GCCCATATCA TTTTCAGGAT TAATTAAAGA GCATGAATCA
GTTAGATATT CAGCAGGATT ATTTGATATT TCTCACATGG GTGTGATTTC TATCAAGGGA
ATCAATCCAA AGGATTATAT TCAAAAACTT TTTCCTACTA ATTTATACTC CTTTTGTGAA
GGTCAGGGGC TTTATACAGT AATGCTCAAT GATAAAGGAG GAATAATAGA TGACTTAATA
ATTTATGACC TTGGTATACA AAAAAATGAC ATATCAGAAT TATTGTTAAT AGTTAATGCA
AGTAGATATG AAGAAGATTT TCAGTGGATA AAAAATAATT TAAATATGTC TGAAATTTCG
ATAACAAACT TTAAAAAAGA CAAAGTACTT TTAGCACTAC AGGGAAAAAA CTCATTCGGT
TTATTTGAAG AATGGATTGA ATCTTCGATC TCACATATCC CTAACTTTGG ATGCGAATAT
AAAATTTTTG AACATATTTC CCCTAAGGAA AAAATTTTCT TTTCAAAGAC AGGCTATACG
GGGGAAAATG GTCTAGAAAT ACTTTTATCT AAAAAAGCAG CAATTAATTT ATGGGATTTC
TTAATTTCTA AAAATGTTGC ACCTTGTGGT TTAGGAGCTA GAGATACTCT TAGACTTGAA
GCAGGCATGC ATCTTTATGG GCAAGACATA AATGAAGAAA CTTCTCCATA TGAAGCAGGG
TTAGGATGGC TAGTACATCT AGAAAATAAT CACGAATTCA TTGGCAGAAG AGTTCTTGAA
GAACAGTCAA GATTAGGCAT TCAAAAAAAG TTAGTTGGTC TCTCTATAAA AGGTAAAGCA
ATAGGAAGAA AAGGGTGCGC AGTGCTTAAA GGTGATGAAA ATATTGGAAC TATCACTAGC
GGCAGTTGGT CTCCAACTAA ACATCAAGCT ATTGCTTTTG CATACATCAA TACTTCGCAT
GCCTTAATAA ATAATGAAGT TGAAATATTA ATAAGAGGCA AAAAATTCAA CGGGGTTATA
ACAAAAAGAG CGTTTTATAA AAAGAATTAT TAA
|
|---|
| Protein sequence | MDLLKSPLYS KYVESNAKLV DFAGWEMPIS FSGLIKEHES VRYSAGLFDI SHMGVISIKG
INPKDYIQKL FPTNLYSFCE GQGLYTVMLN DKGGIIDDLI IYDLGIQKND ISELLLIVNA
SRYEEDFQWI KNNLNMSEIS ITNFKKDKVL LALQGKNSFG LFEEWIESSI SHIPNFGCEY
KIFEHISPKE KIFFSKTGYT GENGLEILLS KKAAINLWDF LISKNVAPCG LGARDTLRLE
AGMHLYGQDI NEETSPYEAG LGWLVHLENN HEFIGRRVLE EQSRLGIQKK LVGLSIKGKA
IGRKGCAVLK GDENIGTITS GSWSPTKHQA IAFAYINTSH ALINNEVEIL IRGKKFNGVI
TKRAFYKKNY
|
|---|
| |