| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_18741 |
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| Symbol | sqdB |
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| ID | 4718612 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 1608540 |
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| End bp | 1609733 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640079608 |
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| Product | sulfolipid (UDP-sulfoquinovose) biosynthesis protein |
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| Protein accession | YP_001010264 |
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| Protein GI | 123969406 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.110238 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGTTA TTGTTCTAGG TGGAGATGGT TTTTGCGGTT GGCCTTGTGC GGTGAATTTA
GCAGAGCAAA ATCATGATGT AATTATTGTC GACAATTTAA GTCGTAGAAA AATTGATATT
GATCTAGAGG TAGAATCTTT AACTCCAATT TCTTCCATAA CAGAACGACT TTCTGCATGG
GAAGAGACTG GAGGCAAGCC TATGAGATTT CTTAACATGG ATATCTCTAA GCAATATCAA
AAATTACTCA ATTTGCTCAT TGATGAAAAA CCAGATTCCG TGATCCATTT TGCAGAACAA
AGAGCAGCAC CATACTCGAT GAAATCGAGT TTTACCAAAA GATATACAGT AGATAATAAT
GTTAATGGCA CCCACAACTT GCTTGCTGCG ATAGTAGAGA GTAATTTAGA TATTCATGTT
GTTCATTTAG GAACAATGGG AGTCTACGGA TATGGATCAC ATAGAGGTGC AACAATTCCA
GAAGGTTATC TAAAAGTTGA AGTTCCACAA CCTGATGGAA GCCGCTTTGA AGAAGAAATA
TTACACCCTG CAAGCCCAGG TAGTGTCTAC CACATGACTA AAACTTTAGA TCAATTATTA
TTTCTTTACT ACAACAAAAA TGATCTTGTA AGGATCACTG ATCTACACCA AGGCATTGTT
TGGGGAACAA ATACAGAAGC AACTTTAAAA GATCCTAGAT TGACAAACAG ATTTGACTAT
GACGGAGATT ATGGAACTGT TTTAAACAGA TTTCTAATGC AAGCTGCAAT TGGATATCCA
TTAAGTGTTC ATGGGACAGG AGGGCAAACA AGAGCATTTA TACATATAAA AGACTCTGTC
AAATGCGTAC AACTTGCTCT TGAAAATCCT CCAAAATCTG GAGAAAGAGT CAAAATCTTT
AATCAAATGA CTGAGAGTCA TCAAGTTGGA GAACTAGCTA AAAAAGTTGC TTCTCTAACT
GGAGCTGAAA TCAATTATTT ACCAAATCCA AGGAATGAAG CAGTAGAAAA TGATCTAATT
GTTGATAATA AATGCTTTAT AGAATTAGGT TTAAACCCAA CTACTCTTGA TAATGGCTTA
TTAGAAGAAG TTGTTGAAGT TGCTAAAAAA TACTCCAATA GATGTGATCT TAATCGCATA
CCTTGTGTTT CATCCTGGAC AAAAAAACAA GCTGAGGCTA TTAAGACTAA TTAA
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| Protein sequence | MKVIVLGGDG FCGWPCAVNL AEQNHDVIIV DNLSRRKIDI DLEVESLTPI SSITERLSAW
EETGGKPMRF LNMDISKQYQ KLLNLLIDEK PDSVIHFAEQ RAAPYSMKSS FTKRYTVDNN
VNGTHNLLAA IVESNLDIHV VHLGTMGVYG YGSHRGATIP EGYLKVEVPQ PDGSRFEEEI
LHPASPGSVY HMTKTLDQLL FLYYNKNDLV RITDLHQGIV WGTNTEATLK DPRLTNRFDY
DGDYGTVLNR FLMQAAIGYP LSVHGTGGQT RAFIHIKDSV KCVQLALENP PKSGERVKIF
NQMTESHQVG ELAKKVASLT GAEINYLPNP RNEAVENDLI VDNKCFIELG LNPTTLDNGL
LEEVVEVAKK YSNRCDLNRI PCVSSWTKKQ AEAIKTN
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