Gene A9601_18451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_18451 
SymbolmiaA 
ID4718582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1575394 
End bp1576293 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content31% 
IMG OID640079578 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_001010235 
Protein GI123969377 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGAG ACCTTCCTAA TGTCATAATT TTGATTGGGC CTACTGCAAG TGGCAAAACA 
GAATTAGCTA TTGAAATTGC AGAATATTTT AAAACTCATA TACATAATAT CGATTCAAGG
CAAATTTATA AGTCCATGGA TATTGGAACA GCCAAGCCAT CTAAAAACCA ACAAAAAAAA
ATCAAGCATT TTTTAATAGA TATTGAGGAG CCAATCCATC CAATTAATGT TAAACAATTT
CAAGGAATTG CTCAAAAATC AATAAAAAGT GAAATTAAAC AAAATAATCT ACCTTTTCTT
GTTGGAGGTA GTGGGTTGTA TATGAACTCG ATAACAAAAG GTTTTTTTGT ACCAGACGTC
CCACCTCAAA ATGATTTGAG AAAACAATTG GAAGAACTTG GTCAGAAAAA ATGTTGGGAC
TTATTAAAAA ATTGTGATCC ATTATCAACA AAAAAAATTA ATTTTGCTGA CCATATTAGA
ACAATAAGAG CTTTAGAAGT CTTTTACGTC ACAGGAAAAC CTTTGTCAAC TTTGAAAGTG
CAAAGGGCGC CTGACTGGAG AATACTAGAG CTTGGATTAG ATAGAGATAA TTTAAAAGAA
AGAATATTAC AAAGGACAAA AAATATGTTT TCAGCGGGAA TTATTGAAGA GACAAACTAC
CTCATCTCTA AATACGGATT TGATTTGCCA ATATTAGAAA CCATTGGATA TCGAGAAGCT
AAGGATGTTT TAAAAAACCA TTCAACCATT GACAAAGCAA TTGAGTTAAC TACGACAAAA
ACTATCCAAT ATGCAAAAAG ACAAAAAACT TGGTTTCGTA ATAAAAATAA TCCTCTTTGG
CTTGATAACA AAAACCTTCT AAAAGATGCA ATAATTAAGA TAGAGTCTTT TTTAAGCTAA
 
Protein sequence
MSRDLPNVII LIGPTASGKT ELAIEIAEYF KTHIHNIDSR QIYKSMDIGT AKPSKNQQKK 
IKHFLIDIEE PIHPINVKQF QGIAQKSIKS EIKQNNLPFL VGGSGLYMNS ITKGFFVPDV
PPQNDLRKQL EELGQKKCWD LLKNCDPLST KKINFADHIR TIRALEVFYV TGKPLSTLKV
QRAPDWRILE LGLDRDNLKE RILQRTKNMF SAGIIEETNY LISKYGFDLP ILETIGYREA
KDVLKNHSTI DKAIELTTTK TIQYAKRQKT WFRNKNNPLW LDNKNLLKDA IIKIESFLS