Gene A9601_18261 details

Gene Information

• Locus tag: A9601_18261
• Symbol: smpB
• ID: 4718563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1559048
• End bp: 1559542
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 28%
• IMG OID: 640079559
• Product: SsrA-binding protein
• Protein accession: YP_001010216
• Protein GI: 123969358
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.301941
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA ATTCAAACAA AGTTAAAAAA AATACTAATA AAGCAAATAA TTTTAAACTT 
CTAGCTGATA ATAGATATGC AAAATTTCAA TATGCAATAT CTGAAACAAT CGAAGCTGGA 
ATTGAGCTTT TAGGGACTGA AGTAAAGTCT ATTAGAAACG GAAAAGCAAA TTTAAGAGAC 
GGATACTGTT CATTCAGAGA TGGGGAGATC TTATTATTAA ATGTTCACAT TTCACCACAT 
AAAAATGTGG GGTCTTTCTT TAATCATGAT CCACTAAGAA ATAGAAAGTT GCTACTACAT 
AAAAAAGAAA TAATAAAAAT GAAATCTAAT ACTGAAAAAA AAGGAATGAC TATTGTTCCA 
TTATCTCTTT ATTTAAAAGG CTCATGGATA AAACTAACTA TTGGAGTTGG TAAAGGGAAA 
AAATTACATG ACAAACGACA AGATGAAAAA CAAAAAAGCA TAAAAAAAGA AATCAACTCT 
GCACTAAAAA GATAA 

 

Protein sequence

MAKNSNKVKK NTNKANNFKL LADNRYAKFQ YAISETIEAG IELLGTEVKS IRNGKANLRD 
GYCSFRDGEI LLLNVHISPH KNVGSFFNHD PLRNRKLLLH KKEIIKMKSN TEKKGMTIVP 
LSLYLKGSWI KLTIGVGKGK KLHDKRQDEK QKSIKKEINS ALKR