Gene A9601_18151 details

Gene Information

• Locus tag: A9601_18151
• Symbol: rimM
• ID: 4718552
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1547715
• End bp: 1548254
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 640079548
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_001010205
• Protein GI: 123969347
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAATTA AAAATGAATG GTTGATTGTT GGATTTATAA CATCATGTCA TGGAATTAAT 
GGTCAGTTAA AAGTTAAATC TCTAAGTGAT TTTGAAGAAA GATTTTTAAA ACCTGGAATG 
AGATGGTTAC AAAAAGAAAG TGAACATCCT TCAAAAATAG AACTTATATC TGGTTTCAAA 
CAGCCTGGTA AAGAAATCTT TATAGTTAAG TTCAAAGGAA TAAATACAAG AAATCATGCA 
GAGCAACTTA AAAAATGTAA ACTTCTTGTA AAAAGTGATA AACTACCTAA GCTAAAAAAG 
GAAGAATTCC ATTTGTTAGA ACTTATAGAT CTGGAGGTCA AGACTTTAGA AAATGATGAA 
TTAAAAATAA TTGGGAAAGT TATTAATTTA GAAAATGAAA AAAATAATTT ACTTATTATT 
GAACTATTTA AAAATCAAAA AAAAGTTCTC ATTCCATTTG TTAAAGAAAT AGTCCCATTA 
GTAGATATTA AAAATAATTT TTTAATCATC AATCCTCCAA ATGGACTTTT AGAACTATAA 

 

Protein sequence

MIIKNEWLIV GFITSCHGIN GQLKVKSLSD FEERFLKPGM RWLQKESEHP SKIELISGFK 
QPGKEIFIVK FKGINTRNHA EQLKKCKLLV KSDKLPKLKK EEFHLLELID LEVKTLENDE 
LKIIGKVINL ENEKNNLLII ELFKNQKKVL IPFVKEIVPL VDIKNNFLII NPPNGLLEL