Gene A9601_17531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_17531 
SymbolrplE 
ID4718485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1492299 
End bp1492838 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content36% 
IMG OID640079481 
Product50S ribosomal protein L5 
Protein accessionYP_001010143 
Protein GI123969285 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCTAA AAAATCGCTA CAAAGAATCA ATAAGACCAA AACTTTTAAA GGATCTTGGC 
CTTAAAAATA TTCATCAAGT ACCAAAAGTT GTCAAAGTCA ACGTTAACAG AGGTCTTGGT
GAAGCAGCTT CGAATTCGAA AGCTCTTGAA GCCTCTTTAA ATGAAATGGC AACAATTACA
GGACAAAAGG CTTTAGTAAC TAGGGCCAAA AAAGCTATCG CGGGTTTTAA AATTCGTGAG
GGCATGCCTA TTGGTTGTAC TGTAACTTTG AGAGGAGACA GGATGTATTC CTTTTTGGAG
AGATTTATAA ATCTAGCTTT ACCAAGAATA AGAGACTTTA GGGGAGTTAA TCCAAAAAGT
TTTGATGGGA GAGGTAATTA CACCGTTGGC GTGAAAGAGC AATTGATTTT TCCTGAAATC
TCTTTTGATA AAATAGATTC AATAAGAGGT ATGGATATAA CTATTGTCAC TAGTGCAAAA
TCAGATCAAG AAGGTAAAGC TCTTTTGCAG GAGTTAGGAA TGCCTTTTAG TAAGAATTAA
 
Protein sequence
MTLKNRYKES IRPKLLKDLG LKNIHQVPKV VKVNVNRGLG EAASNSKALE ASLNEMATIT 
GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGDRMYSFLE RFINLALPRI RDFRGVNPKS
FDGRGNYTVG VKEQLIFPEI SFDKIDSIRG MDITIVTSAK SDQEGKALLQ ELGMPFSKN