Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_17531 |
Symbol | rplE |
ID | 4718485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1492299 |
End bp | 1492838 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640079481 |
Product | 50S ribosomal protein L5 |
Protein accession | YP_001010143 |
Protein GI | 123969285 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0094] Ribosomal protein L5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTAA AAAATCGCTA CAAAGAATCA ATAAGACCAA AACTTTTAAA GGATCTTGGC CTTAAAAATA TTCATCAAGT ACCAAAAGTT GTCAAAGTCA ACGTTAACAG AGGTCTTGGT GAAGCAGCTT CGAATTCGAA AGCTCTTGAA GCCTCTTTAA ATGAAATGGC AACAATTACA GGACAAAAGG CTTTAGTAAC TAGGGCCAAA AAAGCTATCG CGGGTTTTAA AATTCGTGAG GGCATGCCTA TTGGTTGTAC TGTAACTTTG AGAGGAGACA GGATGTATTC CTTTTTGGAG AGATTTATAA ATCTAGCTTT ACCAAGAATA AGAGACTTTA GGGGAGTTAA TCCAAAAAGT TTTGATGGGA GAGGTAATTA CACCGTTGGC GTGAAAGAGC AATTGATTTT TCCTGAAATC TCTTTTGATA AAATAGATTC AATAAGAGGT ATGGATATAA CTATTGTCAC TAGTGCAAAA TCAGATCAAG AAGGTAAAGC TCTTTTGCAG GAGTTAGGAA TGCCTTTTAG TAAGAATTAA
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Protein sequence | MTLKNRYKES IRPKLLKDLG LKNIHQVPKV VKVNVNRGLG EAASNSKALE ASLNEMATIT GQKALVTRAK KAIAGFKIRE GMPIGCTVTL RGDRMYSFLE RFINLALPRI RDFRGVNPKS FDGRGNYTVG VKEQLIFPEI SFDKIDSIRG MDITIVTSAK SDQEGKALLQ ELGMPFSKN
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