| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_17521 |
|---|
| Symbol | rpsH |
|---|
| ID | 4718484 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 1491888 |
|---|
| End bp | 1492289 |
|---|
| Gene Length | 402 bp |
|---|
| Protein Length | 133 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640079480 |
|---|
| Product | 30S ribosomal protein S8 |
|---|
| Protein accession | YP_001010142 |
|---|
| Protein GI | 123969284 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0096] Ribosomal protein S8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAATC ACGATCCTAT TTCAGATATG CTAACTCGAA TTAGAAATGC GAGTCAAAAA
AAGCATACAA CCACAACAAT CCCAGGTTCA AAAATGTCCT TAAGTATCGC TAAAGTACTT
CAAAAAGAGG GGTTCATTTC TGACATTAAT GAGGAAGGTG AAGGTTATAA ATCACAAATA
ATACTCGGCC TCAAATATAG TGGAAAAAAC AAATTTCCTA CTATTCGATC TATGCAAAGA
GTTAGTAAAC CTGGTTTGAG AATATATAAA AATACTAGAG GTTTACCAAA AGTTCTTGGA
GGTCTTGGAG TTGCCATAAT ATCAACTTCT AAAGGCGTTA TGAGTGATCG CGATGCTAGA
AAGCAAGGCA TTGGCGGCGA AGTCCTCTGC TATGTTTATT AA
|
|---|
| Protein sequence | MSNHDPISDM LTRIRNASQK KHTTTTIPGS KMSLSIAKVL QKEGFISDIN EEGEGYKSQI
ILGLKYSGKN KFPTIRSMQR VSKPGLRIYK NTRGLPKVLG GLGVAIISTS KGVMSDRDAR
KQGIGGEVLC YVY
|
|---|
| |