Gene A9601_17491 details

Gene Information

• Locus tag: A9601_17491
• Symbol: rpsE
• ID: 4718481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 1490319
• End bp: 1490939
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640079477
• Product: 30S ribosomal protein S5
• Protein accession: YP_001010139
• Protein GI: 123969281
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01021] ribosomal protein S5, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGACA CTCCAACAAA ACAAGAAATT CAATCCAAGA ACGATAATGT TCCTGCAGCT 
ACGCCAGTAG AACAAAAAAA GAATAATCGT AATGATCGCA AAAGAAATAG AAGAGGTGAT 
TCAAAAAATC TAGAGAGAGA TTCTGATTGG CAAGAAAGGG TTGTTCAAAT TCGACGTGTT 
TCTAAGACTG TTAAGGGTGG AAAAAAAATG AGTTTTAGAG CAATAGTTGT CGTTGGTAAT 
GAAAAAGGTC AAGTCGGAGT TGGGGTTGGT AAAGCTGGTG ATGTCATTGG TGCAGTTAGA 
AAGGGAGTTT CAGATGGTAA AAAGAATCTT GTCAGAGTTC CATTAACGCC AAATAATTCA 
ATTCCAACTT TATCTTTAGG TAGTGATGGT GCGGCAAACG TGCTGATTAG GCCTGCCGCT 
CCAGGTACAG GTGTAATTGC TGGCGGTTCA ATTAGAACGG TTTTAGAATT AGCTGGTATA 
AAAAATGTCT TGGCAAAAAG ACTGGGCAGT AAAACACCTT TGAATAATGC AAGAGCTGCT 
ATGGTAGCTC TTTCTCAATT AAGAACACAC AAATCTGTTT CAAGGGAGAG AGGCATCTCA 
CTTGAACAGC TCTATTCTTG A 

 

Protein sequence

MTDTPTKQEI QSKNDNVPAA TPVEQKKNNR NDRKRNRRGD SKNLERDSDW QERVVQIRRV 
SKTVKGGKKM SFRAIVVVGN EKGQVGVGVG KAGDVIGAVR KGVSDGKKNL VRVPLTPNNS 
IPTLSLGSDG AANVLIRPAA PGTGVIAGGS IRTVLELAGI KNVLAKRLGS KTPLNNARAA 
MVALSQLRTH KSVSRERGIS LEQLYS