Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_17271 |
Symbol | psaB |
ID | 4718458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1469416 |
End bp | 1471644 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640079454 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_001010117 |
Protein GI | 123969259 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAACAA AATTTCCATC ATTTAACCAG GGTCTAGCTC AGGACCCCAC AACCCGACGA ATATGGTACG GGATAGCTAC CGCTCATGAC TTTGAAAGTC ATGATGGTAT GACCGAAGAA AAACTTTATC AGAAGCTATT CTCTACACAT TTTGGACATC TAGCAATAAT CGCTCTCTGG GTAGCTGGTA ACTTATTCCA TATTGCTTGG CAGGGTAACT TTGAGCAATT TGTACTCGAT CCGACTCATG TACGTCCTAT AGCTCATGCT ATTTGGGACC CTCATTTTGG ATCTGGCATC ACAGAAGCAA TGACACAAGC TGGAGCAAGC GGTCCAGTAA ACATAGCTTA TTCAGGTCTC TACCATTGGT GGTACACAAT TGGAATGAGA ACTAACGAGC AACTCTTCCA AGCATCAATA TTTATGAGCA TTCTTGCTTG TTGGACTTTA TTTGCAGGTT GGTTACACTT ACAACCAAAA TTCAGACCTT CTCTGGCATG GTTTAAAAAT GCAGAGTCAA GATTAAATCA TCACTTGGCT GTTTTATTTG GTTTTAGTAG TATCGCTTGG ACAGGTCATT TAGTTCATGT TGCAATACCC GAATCAAGAG GACAGCATGT AGGCTGGGAT AACTGGTTAA CGGTTCTTCC ACACCCTGCA GGATTAGCTC CTTTCTTTAC TTTAAACTGG GGAGCATATG CACAAAATCC TGATTCCTTA GACCAAGTAT TTGGAACAGC TGAAGGAGCT GGAACAGCAA TCTTCACTTT CTTAGGAGGT CTTCATCCTC AAAGTGAAGC ATTATGGCTT ACTGATATTG CTCATCACCA TATTGCAATT GGAACAGTTT TTGTAATTGC TGGCCACATG TATAGAAATA CTTTTGGCAT AGGGCATAGC CTCAAAGAAA TTACAGAGGC TCATAATACT AGACACCCAA ATGATCCTCA TAAAGGTAGT TTCGGAATTA ATCATGATGG TATATATGAA ACTGTAAATA ACTCATTACA TTTCCAACTC GGACTAGCAT TAGCATCACT TGGAGTAGCA ACTTCTCTTG TGGCGCAACA TATGGGAGCA CTTCCTTCTT ATGCTTTTAT CGCTAGGGAC TACACTACAC AATCTGCTTT ATATAGTCAC CATCAATACA TAGCAATGTT CTTGATGGTT GGTGCTTTTG CACACGGAGC TATTTTCTTT GTGAGAGATT ACGATCCTGA ATTAAATAAA GATAATGTAT TAGCGAGAGT TCTTGGAACA AAAGAAGCTT TAATAAGTCA CCTTAGTTGG GTAACAATGT TGCTTGGATT CCATACTCTT GGAATATATG TCCATAACGA TGTTGTTGTA GCTTTTGGTA ATCCTGAAAA GCAAATTTTA ATTGAGCCAG TATTTGCTCA ATTTGTTCAA GCAGCTCAAG GTAAGATGAT GTATGGCTTC AATGCTCTAC TATCTGATCC TACAAGTTCA GCAAGTCTTG CTGCTAATTC ATTACCAGGT AATCATTACT GGATGGATCT TATCAACAGA CAAGATGCTT TAAGTGCATT CTTACCTATA GGTCCTGCAG ATTTCTTAGT TCATCATGCT ATTGCTTTAG GTCTTCATAC AACTGCTTTA ATCCTTATCA AGGGGGCTCT TGATGCTAGA GGTACCAAAT TAATTCCTGA TAAGAAAGAC TTAGGTTACG CATTCCCTTG TGATGGTCCT GGACGTGGAG GTACTTGTGA TAGTTCATCA TGGGACGCTA TGTATTTAGC TATGTTTTGG GCATTAAATT TACTAGCATG GGTAACTTTC TACTGGCATT GGAAACATTT AGCAATTTGG CAGGGTAATG TAGCACAATT TAATGAATCA GGAACTTATT TAATGGGTTG GTTCAGAGAT TATCTCTGGT TAAACTCTGC TCAACTGATT AACGGATATA ATCCATTTGG AGTAAACTCA TTATCTCCTT GGGCTTGGAT GTTCCTATTC GGACATTTAG TTTGGGCTAC TGGTTTCATG TTCCTAATAT CATGGCGTGG TTACTGGCAA GAATTAATTG AAACATTAGT TTGGGCACAT CAACGTACTC CCATTGCTAA CCTTGTTGGC TGGAGAGATA AGCCAGTAGC ACTCTCAATT GTTCAAGCTA GATTAGTTGG TTTAGCACAT TTCACGATTG GTAACATTCT TACTTTCGGT GCATTCGTGA TTGCATCAAC TTCTGGTAAG TTTGGCTAG
|
Protein sequence | MATKFPSFNQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE KLYQKLFSTH FGHLAIIALW VAGNLFHIAW QGNFEQFVLD PTHVRPIAHA IWDPHFGSGI TEAMTQAGAS GPVNIAYSGL YHWWYTIGMR TNEQLFQASI FMSILACWTL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NWLTVLPHPA GLAPFFTLNW GAYAQNPDSL DQVFGTAEGA GTAIFTFLGG LHPQSEALWL TDIAHHHIAI GTVFVIAGHM YRNTFGIGHS LKEITEAHNT RHPNDPHKGS FGINHDGIYE TVNNSLHFQL GLALASLGVA TSLVAQHMGA LPSYAFIARD YTTQSALYSH HQYIAMFLMV GAFAHGAIFF VRDYDPELNK DNVLARVLGT KEALISHLSW VTMLLGFHTL GIYVHNDVVV AFGNPEKQIL IEPVFAQFVQ AAQGKMMYGF NALLSDPTSS ASLAANSLPG NHYWMDLINR QDALSAFLPI GPADFLVHHA IALGLHTTAL ILIKGALDAR GTKLIPDKKD LGYAFPCDGP GRGGTCDSSS WDAMYLAMFW ALNLLAWVTF YWHWKHLAIW QGNVAQFNES GTYLMGWFRD YLWLNSAQLI NGYNPFGVNS LSPWAWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH QRTPIANLVG WRDKPVALSI VQARLVGLAH FTIGNILTFG AFVIASTSGK FG
|
| |