Gene A9601_17271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_17271 
SymbolpsaB 
ID4718458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1469416 
End bp1471644 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content40% 
IMG OID640079454 
Productphotosystem I P700 chlorophyll a apoprotein A2 
Protein accessionYP_001010117 
Protein GI123969259 
COG category 
COG ID 
TIGRFAM ID[TIGR01336] photosystem I core protein PsaB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACAA AATTTCCATC ATTTAACCAG GGTCTAGCTC AGGACCCCAC AACCCGACGA 
ATATGGTACG GGATAGCTAC CGCTCATGAC TTTGAAAGTC ATGATGGTAT GACCGAAGAA
AAACTTTATC AGAAGCTATT CTCTACACAT TTTGGACATC TAGCAATAAT CGCTCTCTGG
GTAGCTGGTA ACTTATTCCA TATTGCTTGG CAGGGTAACT TTGAGCAATT TGTACTCGAT
CCGACTCATG TACGTCCTAT AGCTCATGCT ATTTGGGACC CTCATTTTGG ATCTGGCATC
ACAGAAGCAA TGACACAAGC TGGAGCAAGC GGTCCAGTAA ACATAGCTTA TTCAGGTCTC
TACCATTGGT GGTACACAAT TGGAATGAGA ACTAACGAGC AACTCTTCCA AGCATCAATA
TTTATGAGCA TTCTTGCTTG TTGGACTTTA TTTGCAGGTT GGTTACACTT ACAACCAAAA
TTCAGACCTT CTCTGGCATG GTTTAAAAAT GCAGAGTCAA GATTAAATCA TCACTTGGCT
GTTTTATTTG GTTTTAGTAG TATCGCTTGG ACAGGTCATT TAGTTCATGT TGCAATACCC
GAATCAAGAG GACAGCATGT AGGCTGGGAT AACTGGTTAA CGGTTCTTCC ACACCCTGCA
GGATTAGCTC CTTTCTTTAC TTTAAACTGG GGAGCATATG CACAAAATCC TGATTCCTTA
GACCAAGTAT TTGGAACAGC TGAAGGAGCT GGAACAGCAA TCTTCACTTT CTTAGGAGGT
CTTCATCCTC AAAGTGAAGC ATTATGGCTT ACTGATATTG CTCATCACCA TATTGCAATT
GGAACAGTTT TTGTAATTGC TGGCCACATG TATAGAAATA CTTTTGGCAT AGGGCATAGC
CTCAAAGAAA TTACAGAGGC TCATAATACT AGACACCCAA ATGATCCTCA TAAAGGTAGT
TTCGGAATTA ATCATGATGG TATATATGAA ACTGTAAATA ACTCATTACA TTTCCAACTC
GGACTAGCAT TAGCATCACT TGGAGTAGCA ACTTCTCTTG TGGCGCAACA TATGGGAGCA
CTTCCTTCTT ATGCTTTTAT CGCTAGGGAC TACACTACAC AATCTGCTTT ATATAGTCAC
CATCAATACA TAGCAATGTT CTTGATGGTT GGTGCTTTTG CACACGGAGC TATTTTCTTT
GTGAGAGATT ACGATCCTGA ATTAAATAAA GATAATGTAT TAGCGAGAGT TCTTGGAACA
AAAGAAGCTT TAATAAGTCA CCTTAGTTGG GTAACAATGT TGCTTGGATT CCATACTCTT
GGAATATATG TCCATAACGA TGTTGTTGTA GCTTTTGGTA ATCCTGAAAA GCAAATTTTA
ATTGAGCCAG TATTTGCTCA ATTTGTTCAA GCAGCTCAAG GTAAGATGAT GTATGGCTTC
AATGCTCTAC TATCTGATCC TACAAGTTCA GCAAGTCTTG CTGCTAATTC ATTACCAGGT
AATCATTACT GGATGGATCT TATCAACAGA CAAGATGCTT TAAGTGCATT CTTACCTATA
GGTCCTGCAG ATTTCTTAGT TCATCATGCT ATTGCTTTAG GTCTTCATAC AACTGCTTTA
ATCCTTATCA AGGGGGCTCT TGATGCTAGA GGTACCAAAT TAATTCCTGA TAAGAAAGAC
TTAGGTTACG CATTCCCTTG TGATGGTCCT GGACGTGGAG GTACTTGTGA TAGTTCATCA
TGGGACGCTA TGTATTTAGC TATGTTTTGG GCATTAAATT TACTAGCATG GGTAACTTTC
TACTGGCATT GGAAACATTT AGCAATTTGG CAGGGTAATG TAGCACAATT TAATGAATCA
GGAACTTATT TAATGGGTTG GTTCAGAGAT TATCTCTGGT TAAACTCTGC TCAACTGATT
AACGGATATA ATCCATTTGG AGTAAACTCA TTATCTCCTT GGGCTTGGAT GTTCCTATTC
GGACATTTAG TTTGGGCTAC TGGTTTCATG TTCCTAATAT CATGGCGTGG TTACTGGCAA
GAATTAATTG AAACATTAGT TTGGGCACAT CAACGTACTC CCATTGCTAA CCTTGTTGGC
TGGAGAGATA AGCCAGTAGC ACTCTCAATT GTTCAAGCTA GATTAGTTGG TTTAGCACAT
TTCACGATTG GTAACATTCT TACTTTCGGT GCATTCGTGA TTGCATCAAC TTCTGGTAAG
TTTGGCTAG
 
Protein sequence
MATKFPSFNQ GLAQDPTTRR IWYGIATAHD FESHDGMTEE KLYQKLFSTH FGHLAIIALW 
VAGNLFHIAW QGNFEQFVLD PTHVRPIAHA IWDPHFGSGI TEAMTQAGAS GPVNIAYSGL
YHWWYTIGMR TNEQLFQASI FMSILACWTL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA
VLFGFSSIAW TGHLVHVAIP ESRGQHVGWD NWLTVLPHPA GLAPFFTLNW GAYAQNPDSL
DQVFGTAEGA GTAIFTFLGG LHPQSEALWL TDIAHHHIAI GTVFVIAGHM YRNTFGIGHS
LKEITEAHNT RHPNDPHKGS FGINHDGIYE TVNNSLHFQL GLALASLGVA TSLVAQHMGA
LPSYAFIARD YTTQSALYSH HQYIAMFLMV GAFAHGAIFF VRDYDPELNK DNVLARVLGT
KEALISHLSW VTMLLGFHTL GIYVHNDVVV AFGNPEKQIL IEPVFAQFVQ AAQGKMMYGF
NALLSDPTSS ASLAANSLPG NHYWMDLINR QDALSAFLPI GPADFLVHHA IALGLHTTAL
ILIKGALDAR GTKLIPDKKD LGYAFPCDGP GRGGTCDSSS WDAMYLAMFW ALNLLAWVTF
YWHWKHLAIW QGNVAQFNES GTYLMGWFRD YLWLNSAQLI NGYNPFGVNS LSPWAWMFLF
GHLVWATGFM FLISWRGYWQ ELIETLVWAH QRTPIANLVG WRDKPVALSI VQARLVGLAH
FTIGNILTFG AFVIASTSGK FG