| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_17101 |
|---|
| Symbol | rpsJ |
|---|
| ID | 4718441 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 1453536 |
|---|
| End bp | 1453856 |
|---|
| Gene Length | 321 bp |
|---|
| Protein Length | 106 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640079437 |
|---|
| Product | 30S ribosomal protein S10 |
|---|
| Protein accession | YP_001010100 |
|---|
| Protein GI | 123969242 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0051] Ribosomal protein S10 |
|---|
| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGCAT CAATCGCACA ACAAAAAATA AGAATTAGGC TCAAAGCATT TGATAGAAGA
ATGCTTGATT TATCTTGTGA CAAAATAATT CAAACTGCTG ATACCACTTC TGCCTCAGCA
ATAGGTCCAA TACCTTTACC TACAAAAAGG AAGATTTATT GTGTCCTAAG ATCACCACAT
GTTGATAAAG ATTCTAGAGA GCATTTTGAA ACAAGAACAC ATCGAAGAAT AATAGATATC
TACAGTCCTT CTGCAAAAAC TATTGACGCT TTAATGAAAC TTGATCTCCC TAGTGGTGTA
GATATAGAAG TTAAACTTTA A
|
|---|
| Protein sequence | MTASIAQQKI RIRLKAFDRR MLDLSCDKII QTADTTSASA IGPIPLPTKR KIYCVLRSPH
VDKDSREHFE TRTHRRIIDI YSPSAKTIDA LMKLDLPSGV DIEVKL
|
|---|
| |