Gene A9601_17051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_17051 
SymbolrnhB 
ID4718436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand+ 
Start bp1449866 
End bp1450483 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content30% 
IMG OID640079432 
Productribonuclease HII 
Protein accessionYP_001010095 
Protein GI123969237 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.492555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAA AAAAAGAAGA AGATCTTCAG CAAGCATTGA ATAAAGTATC AGAAGTTGGA 
ATAGATGAAG TTGGAAAGGG AGCAATTTTT GGTCCAGTTT TTGCAGCAGC TGTAGTATTA 
ACAGAAAAAA ATAAATTTAT CTTAAAACAA TTTGGAGTAA CAGATAGTAA AAAACTAACT 
CCCAAAAAAA GAAAATTACT TTTACCAAAA ATTTTATTAC TCTCTTCAGA TTATGGAATT 
GGGCAATCTT CGGCCAGAGA AATAGATAAG TTAGGTATTA GGGTTGCGAC GGAACTTTCA 
ATGATAAGAG CTTTAAGAAA ATTAAAAGAA AAGCCATCTG AATTAATAAT TGATGGCCCC 
TTATTATTAA GACCATGGAA CGGAATTCAG AAAAACATAG TATCAGGAGA TTCAAAGTTT 
ATCTCGATAG CTTCAGCAAG CATAGTTGCC AAAGTTTCAC GCGATAATCT AATGGAGAGG 
TTAGAAAAAA ATTACTCAGG ATACTTGATA TTTAAAAATA AAGGTTATGG AACCAGAGAG 
CATCTTTCAT TAATCAAAAA AAATGGAATA ACTGAACTTC ATAGGAAAAG TTTTTTAAAA 
AAATCAAAAC TTATTTAA
 
Protein sequence
MQEKKEEDLQ QALNKVSEVG IDEVGKGAIF GPVFAAAVVL TEKNKFILKQ FGVTDSKKLT 
PKKRKLLLPK ILLLSSDYGI GQSSAREIDK LGIRVATELS MIRALRKLKE KPSELIIDGP 
LLLRPWNGIQ KNIVSGDSKF ISIASASIVA KVSRDNLMER LEKNYSGYLI FKNKGYGTRE 
HLSLIKKNGI TELHRKSFLK KSKLI