| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_17041 |
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| Symbol | rne |
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| ID | 4718435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 1448089 |
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| End bp | 1449909 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640079431 |
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| Product | ribonuclease E/G |
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| Protein accession | YP_001010094 |
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| Protein GI | 123969236 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.925066 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAGC AAATTATCAT CGCTGAGCAG GCTCGAATTG CAGCACTACT CACAGATGAT
CGAGTTGATG AATTAATCGT CGCACAAGGT CAATATCAAA TTGGCGATAT TTTTTTAGGA
ACAGTTGAAA ACGTTCTCCC TGGTATTGAT GCAGCTTTCA TAAATATCGG TGAAAGTGAG
AAAAATGGAT TCATCCATGT TTCAGATTTA GGTCCACTAA GACTCAAAAA AGGGACATTT
GGAATAACGG AATTACTAGA ACCAAAACAA AAAGTCCTAG TGCAGGTAAT AAAGGAACCT
ACAGGATCTA AAGGGCCTAG ACTAACCGGG AGCATTTCAA TCCCAGGGAA ATACTTGATA
CTACAGCCAT ATGGACAAGG AGTAAATATT TCAAGAAAAA TAAATACAGA AACAGAGCGA
AGCCGTTTGA AAGCTCTTGG GGTTTTAATT AAACCACCTA GCACAGGCTT GTTATTTAGA
ACAGAGGCTG AAAAGATAAA AGAAGAACTT CTAATTGAAG ATTTAGAACA TTTAATTCAA
CAATGGGAAA ATATACTAAA AGTTTCTGAG GCTTCTAATC CGCCAAATTT AATAAAAAGA
GATGATGATT TCTCTCTTAA GATCTTAAGA GATTATATTA AAGAATCTAC TAAAAGTTTA
ATTATCGATA GTAAATTTTC AGTTATAAGG GCAAAAGATT TTTTAATAAA TTATGAGTCT
AATGTAGATA TTGAATTTCA CGATAACAGT TTAAACCAAC ATATTTTGGA GAAGTATGAA
ATTAAGAAAA CAATTCAAAA AGCTCTCCAG CCGAGAGTAG ATCTTCCTTC GGGGGGTTAT
ATAATTATTG AACCTACTGA AGCTTTAACA GTAATCGACG TAAACTCTGG ATCATTTACC
AGATCCGCTA ACTCAAGACA AACCGTTTTG TGGACGAACT GCGAAGCAGC AGTTGAAATC
TCAAGACAAA TGAAATTAAG AAATATCGGT GGAGTTATAG TAGTTGATTT TATTGATATG
GAATCTAGAA GAGATCAATT TCAGTTACTT GAACATTTTA CCTCAGCAAT AAAAGATGAT
TCTGCTAGGC CTCAAATAGC TCAGCTTACT GAATTAGGTT TAGTGGAGTT AACAAGAAAA
AGACAAGGGC AAAATATATA TGAACTATTC GGCAAAAAAT GTTCTTCATG CGACGGTACA
GGACATGTAG AAAATATATT AAATCACGAA ATTTCTTACT TAAAAATTAA AAATGTTGAA
AATAAATCTA ATCAATCAAA CAATTTAACA TCTTTAGATA TAGTTACTTC TCAATCAACT
GATGAGCAAG AAAAAATAAT TGACAAGGAA TTACTGAATT CCAAAGACCT AAGTAAAGAA
AATTCTTCGA ATAAAAAAGA AAATGAAAAT GATAATTTAA ACCAATCAAA TTCAAAAGAA
AAAAATATAA TAACAGTTGA TCTTACTAAT GAAGAAAAAA TTGTTTTCAG TGAATTGGGT
ATAAATCCAC TTATAAAGTT AGGTAAAGAA TATCTAACTA GCAATAATTT TGTGCGATTA
AAAGAGAGTA ATAAGGAAAC GGAAAAACCC TTAGATAATA AAAAAGCAAC ATCAAAAAAA
ACTAAAAAAA TCTCACAATC GGGAGAAGAA AAGATTCAAA TTAAAATTGA AGCAAATGCA
AGTTCTAAAG ATAAAACTTC AAATAAAACT AATGAAAGTA ATGAAGTTGT ATCTACAGAT
AAAAAGGATC AAATTGAACT TACAGATGAG CTAAACAATG CAAGAAAAAA AAGAAGAAGA
TCTTCAGCAA GCATTGAATA A
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| Protein sequence | MSQQIIIAEQ ARIAALLTDD RVDELIVAQG QYQIGDIFLG TVENVLPGID AAFINIGESE
KNGFIHVSDL GPLRLKKGTF GITELLEPKQ KVLVQVIKEP TGSKGPRLTG SISIPGKYLI
LQPYGQGVNI SRKINTETER SRLKALGVLI KPPSTGLLFR TEAEKIKEEL LIEDLEHLIQ
QWENILKVSE ASNPPNLIKR DDDFSLKILR DYIKESTKSL IIDSKFSVIR AKDFLINYES
NVDIEFHDNS LNQHILEKYE IKKTIQKALQ PRVDLPSGGY IIIEPTEALT VIDVNSGSFT
RSANSRQTVL WTNCEAAVEI SRQMKLRNIG GVIVVDFIDM ESRRDQFQLL EHFTSAIKDD
SARPQIAQLT ELGLVELTRK RQGQNIYELF GKKCSSCDGT GHVENILNHE ISYLKIKNVE
NKSNQSNNLT SLDIVTSQST DEQEKIIDKE LLNSKDLSKE NSSNKKENEN DNLNQSNSKE
KNIITVDLTN EEKIVFSELG INPLIKLGKE YLTSNNFVRL KESNKETEKP LDNKKATSKK
TKKISQSGEE KIQIKIEANA SSKDKTSNKT NESNEVVSTD KKDQIELTDE LNNARKKRRR
SSASIE
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