Gene A9601_16411 details

Gene Information

• Locus tag: A9601_16411
• Symbol: atpC
• ID: 4718371
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1387557
• End bp: 1387961
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 640079367
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_001010031
• Protein GI: 123969173
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.662603
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAATCT CTTTAAAAGT TTTAGCTCCT AATAAAAATG TTTATCAAGG CGAAGCTGAA 
GAAGTAATCC TTCCTAGTAC TACTGGTCAA CTTGGGATAC TACCAGGACA CATTTCTTTA 
GTTACTGCTA TAGATATTGG CGTTTTAAGG CTAAGAATGA ATTCCCAGTG GAAATCAATA 
GCTCTTATGG GAGGCTTCGC TGAAATTGAA TCAGATGAAG TTATAGTTTT AGTAAATAAT 
GCGGAAATTG GTTCTGAAAT TAATGTTCAA AATGCTGAAC AAGATCTTAA AGAAGCAAAA 
TTAGCAATTA GCAAATTTTC TGAAAATGAA AAAAATCCAG AAAAAATTAA AGCCTTGAAA 
GAGATTTCAA AGGCTGAAGC TAGGATTCAA GCAGCAAAGA ACTAA 

 

Protein sequence

MAISLKVLAP NKNVYQGEAE EVILPSTTGQ LGILPGHISL VTAIDIGVLR LRMNSQWKSI 
ALMGGFAEIE SDEVIVLVNN AEIGSEINVQ NAEQDLKEAK LAISKFSENE KNPEKIKALK 
EISKAEARIQ AAKN