| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_16401 |
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| Symbol | atpD |
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| ID | 4718370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 1386054 |
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| End bp | 1387514 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640079366 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001010030 |
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| Protein GI | 123969172 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTAGCAA CTCCATCAAT TTCTTCACAA ACAAAAGGCG TAGTACGTCA GGTAATTGGC
CCAGTTCTAG ATGTAGAATT TCCAGCTGGT AAATTACCCA AAATATTAAA TGCTTTAAGG
ATTGAAGCTA AAAATCCTGC GGGACAAGAT ATAGCGCTTA CTGCAGAGGT CCAACAGCTC
CTAGGTGACC ACAGAGTAAG AGCAGTTGCA ATGAGTGGCA CAGACGGCCT TGTAAGGGGC
ATGGAAGCAA TCGACACAGG TGCACCAATA TCAGTACCTG TGGGAGAGGC AACTTTAGGA
AGAATATTTA ATGTTTTAGG AGAGCCAGTA GATGAACAAG GTCCAGTAAA TACTAAAGAT
ACTGCTCCAA TTCATAGAGC TGCTCCAAAG TTAACCGACC TAGAAACCAA GCCAAAAGTT
TTTGAAACTG GTATTAAAGT TATTGACCTT TTAGCTCCTT ATAGACAAGG AGGAAAAGTT
GGATTATTCG GAGGCGCTGG TGTTGGGAAA ACGGTTCTTA TTCAAGAATT GATCAATAAT
ATCGCAAAAG AACATGGTGG GGTTTCTGTA TTTGGTGGCG TAGGGGAAAG AACTAGAGAG
GGGAACGATT TATACGAAGA ATTTAAAGAA TCAGGCGTTA TCAATGCAGA TGATTTAACT
CAATCAAAAG TTGCCTTATG TTTTGGACAG ATGAATGAGC CACCTGGTGC AAGAATGAGA
GTAGGCTTAT CAGCACTTAC AATGGCAGAA CATTTTAGAG ATGTAAATAA ACAAGACGTT
CTACTTTTTG TTGATAACAT TTTTAGATTC GTTCAAGCTG GCTCTGAAGT ATCTGCATTA
CTTGGAAGAA TGCCTTCAGC TGTTGGATAC CAACCAACTC TTGGAACTGA TGTTGGTGAA
CTGCAAGAAA GGATTACATC TACATTAGAA GGGTCAATAA CATCTATCCA GGCTGTATAC
GTACCTGCAG ATGACCTAAC AGACCCTGCT CCAGCTACAA CATTTGCCCA TTTAGATGCT
ACCACTGTGC TTGCCAGAGC TCTTGCAGCT AAGGGAATTT ATCCAGCAGT AGATCCACTA
GACTCAACAA GCACTATGCT ACAACCATCA GTTGTTGGCG ATGAGCATTA CAAAACAGCC
AGAGCTGTAC AATCAACTTT ACAAAGATAC AAAGAACTTC AAGACATTAT TGCAATTCTC
GGTTTAGATG AGCTTTCTGA AGAAGATAGA TTAACAGTTG ACAGGGCCAG AAAAATTGAA
AAATTCCTTT CACAACCTTT CTTTGTTGCA GAAATATTTA CAGGAATGTC TGGTAAATAC
GTAAAATTAG AAGATACCAT TGCTGGTTTC AATATGATTT TGTCAGGTGA GTTGGATGAT
TTACCAGAAC AGGCATTTTA CTTAGTTGGG AATATTGATG AAGTTAAAGC AAAGGCTGAA
AAAATAAAAT CAGAAAAATA A
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| Protein sequence | MVATPSISSQ TKGVVRQVIG PVLDVEFPAG KLPKILNALR IEAKNPAGQD IALTAEVQQL
LGDHRVRAVA MSGTDGLVRG MEAIDTGAPI SVPVGEATLG RIFNVLGEPV DEQGPVNTKD
TAPIHRAAPK LTDLETKPKV FETGIKVIDL LAPYRQGGKV GLFGGAGVGK TVLIQELINN
IAKEHGGVSV FGGVGERTRE GNDLYEEFKE SGVINADDLT QSKVALCFGQ MNEPPGARMR
VGLSALTMAE HFRDVNKQDV LLFVDNIFRF VQAGSEVSAL LGRMPSAVGY QPTLGTDVGE
LQERITSTLE GSITSIQAVY VPADDLTDPA PATTFAHLDA TTVLARALAA KGIYPAVDPL
DSTSTMLQPS VVGDEHYKTA RAVQSTLQRY KELQDIIAIL GLDELSEEDR LTVDRARKIE
KFLSQPFFVA EIFTGMSGKY VKLEDTIAGF NMILSGELDD LPEQAFYLVG NIDEVKAKAE
KIKSEK
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