Gene A9601_16001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_16001 
Symbol 
ID4718328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1360215 
End bp1361420 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content31% 
IMG OID640079326 
Productputative permease 
Protein accessionYP_001009990 
Protein GI123969132 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.245859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACTTT CAAATAAATC ACTAATTAAA TCAACTATTA ATAAATTAAT TAGTCCTTGG 
TATTCAATAC CTCTAATCGA TAGATGGTTA CTTGGGCAAA TAATACCCCC TATGTTATTT
GCTATTTCTG CTTTTACTGT TATCTCATTA TCTGTTGGGG TAATGTTCGA TCTAATAAGG
AAAATAGTTG AGTATGGTTT ACCACTTTTT CTAGCGTTAA AAGTTCTCTT TTTTAGCTTA
CCAAGCTTTC TAGTGTTGTC ATTCCCGATG GCAGTTTTAC TCTCTACTTT ATTAGCCTAT
GGAAAGTTAT CAAGCAATTC TGAATTATTA GCACTGAAAT CATTGGGAAT AAAAACTTCA
AGAATTATTT CTCCAGCTAT CGCTCTTTCA ATATTTATGA CAGGATTAAC TTTTTACTTT
AACGATAATT TAGTTCCCAA AAGTAACAAG TTAGCTGAAA CAACATTAAG AGCAGGGATA
GGAAGTTCTT TCAGCGAAGA AAAAGGAAAA GAAAACATTA TGTTTTCAAG ATATGGATCC
AGAATAAATT CCGAAACTAA AAAACCAACA AAAAATAATT CTAAACTCAC TCATATTTTT
TATTCCCAAT GGTATGAAAA CAAGATCATG AAAAACGTTA CAGTATTAGA TTTTTCCAGA
GAAGATTTTC AACAAATTTT AAAAGCAAAC TCTGGAAGAT TTGACAAAAA AAGTTCTTCT
TGGATTTTTT CTAACGGGAG TATTGTATCA ATTGATTCAG GTGGACAAAC TACAAATATT
CAATTTAAAG AATATAAATA TCCATTTGTG GAAGGACCCA TGGAGTTAGC AAAAGTACCT
AAGGATGCCA ATGAAATGAC TTTAAAGCAG GCTATACAAG CAGAAAAAAT TTATAAAAAA
ACTGGAAACT TGAAAGAGGT TAGAAGAATG AAAGTCCGCA TTCAAGAAAA ATTTACTCTA
CCTTTTGCAT GCTTGGTCTT TGGTTTAATA GGAAGCAGTC TGGGATCTAA ATCTAATTTA
AGATCTTCAA AAAGCCAGGG ATTTGGATTG AGCGTAATTC TTATATTAAT TTATTATGTA
ATGTCATTTA TATTTAGTTC CTTCGGAGTA AAAGGTATTT TACCTCCAAT TTTTGCTGCA
TGGTTACCTG TCTTAATTTC TCTGGGAGGT GGAATTTATT TGTTAAGAAA ATCAAGTTCT
TTTTAA
 
Protein sequence
MKLSNKSLIK STINKLISPW YSIPLIDRWL LGQIIPPMLF AISAFTVISL SVGVMFDLIR 
KIVEYGLPLF LALKVLFFSL PSFLVLSFPM AVLLSTLLAY GKLSSNSELL ALKSLGIKTS
RIISPAIALS IFMTGLTFYF NDNLVPKSNK LAETTLRAGI GSSFSEEKGK ENIMFSRYGS
RINSETKKPT KNNSKLTHIF YSQWYENKIM KNVTVLDFSR EDFQQILKAN SGRFDKKSSS
WIFSNGSIVS IDSGGQTTNI QFKEYKYPFV EGPMELAKVP KDANEMTLKQ AIQAEKIYKK
TGNLKEVRRM KVRIQEKFTL PFACLVFGLI GSSLGSKSNL RSSKSQGFGL SVILILIYYV
MSFIFSSFGV KGILPPIFAA WLPVLISLGG GIYLLRKSSS F