Gene A9601_15921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_15921 
Symbol 
ID4718319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1355480 
End bp1356514 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content35% 
IMG OID640079318 
Productfatty acid desaturase, type 2 
Protein accessionYP_001009982 
Protein GI123969124 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.430408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTAATA TAAAATTTTC AGGTCTTAAA GGCCAAGCGC TTGTAATAGA GGATAAAGAT 
ATTCCAAGCA TAAAAGAATT TCAGGATGTT ATCCCAGATC ACTACTTTAA GTGCAATACC
AAAACTTCTT TGAGGTATCT TTTACAATCA ACTTTAATTC AATTATTAAT AGTTGCGATA
GGGTTATCTA TTCCATTTAC CCCAAAAATG ATCCCAATTT GGATTATTTA CGCATTTCTA
TCAGGCACCA CTGCAATGGG ATTCTGGGTA ATTGCCCATG AATGTGGGCA TGGAGCATTC
TCTAAAAACA AGACGCTGGA GTCTATTACT GGTTATTTCC TACATTCATT ACTTCTAGTG
CCTTATTTTT CTTGGCAGCG TTCTCATGCT ATTCATCATC GATTCACAAA TAACATAACC
AATGGAGAAA CTCACGTCCC ATTGGTCATA AAAGGGAATG GAGTTACAGA AAAAGTTGGC
GGAGAAAAAG AATTACATTT TTCAAATTCC TTAGGTAAGA AAAAATATGG AATTCTTCAA
CTTGTCTTAC ATCTAATATT TGGCTGGCCT GCTTATTTAC TTACAGGAAG TACAGGAGGG
CTTAAATATG GTACTTCAAA TCATTTTTGG CCAATAAAAC CATTTTCTAA AGCATTATGG
CCATCAATAT GGGCCAAGAA AGTTTGGATA TCAGATATAG GTGTATGTTT AACATTAGTG
GGCATAGTTT ATTCAGTTTT CAAGTATGGA TTATTTCCAG TAATTGCTAT GTATTTTGGC
CCTTTATTAG TGGTTAATTG TTGGCTAGTA GTTTATACAT GGCTTCATCA TACAGATTCA
GATGTGCCTC ATCTTTCAAA TACGGAATTT TCCTTTATGA AAGGCGCATT TCTGTCTATT
GACAGGCCTT ACGGTAGAGT CCTTAATTTT CTTCACCATA ATATAGGTTC TAGCCATGTC
GTTCATCATG TATGTCCAAC GATCCCTCAT TATCATGCAA AAAAGGCAAC TGTCTTTATT
AAAAAAGCCT TTTAA
 
Protein sequence
MSNIKFSGLK GQALVIEDKD IPSIKEFQDV IPDHYFKCNT KTSLRYLLQS TLIQLLIVAI 
GLSIPFTPKM IPIWIIYAFL SGTTAMGFWV IAHECGHGAF SKNKTLESIT GYFLHSLLLV
PYFSWQRSHA IHHRFTNNIT NGETHVPLVI KGNGVTEKVG GEKELHFSNS LGKKKYGILQ
LVLHLIFGWP AYLLTGSTGG LKYGTSNHFW PIKPFSKALW PSIWAKKVWI SDIGVCLTLV
GIVYSVFKYG LFPVIAMYFG PLLVVNCWLV VYTWLHHTDS DVPHLSNTEF SFMKGAFLSI
DRPYGRVLNF LHHNIGSSHV VHHVCPTIPH YHAKKATVFI KKAF