| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_15031 |
|---|
| Symbol | codA |
|---|
| ID | 4718225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | - |
|---|
| Start bp | 1286448 |
|---|
| End bp | 1287683 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640079225 |
|---|
| Product | putative cytosine deaminase |
|---|
| Protein accession | YP_001009893 |
|---|
| Protein GI | 123969035 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTAATT CCGGCACAGC TGAGGTTCTT ATTCCCAGAA GCCTTTGTCT AATAGAAGAT
ATAGATAACC TCATTATCGA TGTAGAGGAT TTATGTTCAG TTTCCATTAG TTGGGAGGAT
GGATTAGTTT CTGAGTTAAA GCCTTTAAAA AATAAAATTA CAAAACCAAA AAATATTTTA
TTCCCAAGAT TTGTTGAAAC GCATTCGCAT TTTGATAAAT CTTTTACATG GGCAGACTTT
CCTAATCTGG AATCAAACTA CGGAGGAGCG TTATCAGTAA ATCTTGAAGA ACATAAAACT
AGAACTACAG ATAAGGTTCT TGAGAGAGTT GATAAATCAT TAAAACTTGC CATACAAAAT
GGATACCGAG CAATTAGAAG TCATATCGAT ACATACAAAG GTCAATCTAT TGACATTTGG
ATTGAACTTT TTAAATTACA AAAAATATTT TCATCTGAGT TGACACTACA ATACGTTGCT
CTAGCTCCAG TGGAATTCTG GGATACAACT GATGGAGAAG ATTTGGCAAA AATATTTTCC
TCTAATGGAG GTATTTTAGG AGGTGTTATT GTACCCCCTT TCAATAAAAA AAATACAAGC
AAATTTCTAG CAAAGATGCT TCTTCTTGCT AGAAAATATA AATTAGAAAT TGATTTGCAT
ATAGATGAAT CAATTATTGA ACCTGGAGCG GGAATAAAAG TTTTATTAGA AACAATAGAA
AATTTAAAAA TTAATAGTAT TCCAATCACT TGTAGTCATT TGAGTAGTCT TATTTCTCTA
AGTAATAGTG AGATTTTAAA TTTAGGAGAA AAAATGGCTG AGAAAAATAT TAAGGTTGTT
GCTTTACCCC TAACAAATTT TTGGCTGCTC AATCGAAGTA ATAAAACTAC TTCATTTAAA
AGACCAGTTG CGCCAATAAA GCAATTACAA AAATCACATG TGGATGTATC TCTTGGTAGT
GATAATGTTC AAGACCCTTG GTACCCATTT GGTAATTTTG ACCCTTTTTA TATGCTGTCT
TGCTCGATGC CTATGCTTCA ACTAAATCCC TGGGAGCGAA TGACTCTATC TTCTATTTTT
TTAGCTCCAA GCAGATTATT AAATTTAAAA TGGGATGGTT TAATTAAAAA AGGTTGTCCT
GCTGATTTTG TGATTTTAGA TGCACAAAGG TGGGCAGATG TTTTTTCGAG CAATTTAAAG
AGAAAAGTAT TTATAAACGG CGATTTACAT TCCTAA
|
|---|
| Protein sequence | MSNSGTAEVL IPRSLCLIED IDNLIIDVED LCSVSISWED GLVSELKPLK NKITKPKNIL
FPRFVETHSH FDKSFTWADF PNLESNYGGA LSVNLEEHKT RTTDKVLERV DKSLKLAIQN
GYRAIRSHID TYKGQSIDIW IELFKLQKIF SSELTLQYVA LAPVEFWDTT DGEDLAKIFS
SNGGILGGVI VPPFNKKNTS KFLAKMLLLA RKYKLEIDLH IDESIIEPGA GIKVLLETIE
NLKINSIPIT CSHLSSLISL SNSEILNLGE KMAEKNIKVV ALPLTNFWLL NRSNKTTSFK
RPVAPIKQLQ KSHVDVSLGS DNVQDPWYPF GNFDPFYMLS CSMPMLQLNP WERMTLSSIF
LAPSRLLNLK WDGLIKKGCP ADFVILDAQR WADVFSSNLK RKVFINGDLH S
|
|---|
| |