Gene A9601_14981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_14981 
Symbol 
ID4718219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp1279617 
End bp1280327 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content33% 
IMG OID640079219 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_001009888 
Protein GI123969030 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.348499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTGAAGT CTGGAAAAAA TCCTTCTAAG ATTTTAGTTA CTGAAAAATG GCTAAGAAAG 
AATCAAAATC TAAGCAAAAA ATTTGATGAG TCATTAATAA ATATTGTCTC AGAGGAAGTC
TTGGCGTCAG CGATTTCAAC AATTAATCCA GATGGGATAG CAGCTTTAGT AGAGATTTCA
GCAATACCTA ATTATCAATT TAATAGAAAA GATGATTTTG TTCTTGTTCT CGACAGAATT
CAAGATCCTG GGAATATGGG TAATCTATTT AGAACCGCTT TAGCTGCGGG TGTTAATGCA
ATTTTTTTAG CTGGAGGTGC GCACCCATTA GGCCAAAAGG TATTAAGAGC ATCCTCAGGT
GCAGTTTTTC ATCTGCCATT TTTAAGATTT GATGGCATTG AAGAAGAAAT ATTAAATTCT
TTACTTAATT CTTTGTCTGA ATTATCAAAT GTAGGATTTA AGATTTTCTC TACTAGTAGC
CATAATGAGA GTACAAAAAA ACCTTCAAAA CCTTACTGGG AAGTTGATTG GTCTAGACGT
ACAGCATTAA TTTTGGGTAA TGAAGGTAAA GGTATTCATA AAAAAATTCA AGAAGCTTTT
AATGAAACAA TTACAATTCC GCATAGCGAG ATTGTAGAAT CATTGAATGT GGCTTGTGTT
GCAGTTCCGT TATTACTTGA ACGAAAAAGA GTCGCATATA CCTCTAAATA A
 
Protein sequence
MLKSGKNPSK ILVTEKWLRK NQNLSKKFDE SLINIVSEEV LASAISTINP DGIAALVEIS 
AIPNYQFNRK DDFVLVLDRI QDPGNMGNLF RTALAAGVNA IFLAGGAHPL GQKVLRASSG
AVFHLPFLRF DGIEEEILNS LLNSLSELSN VGFKIFSTSS HNESTKKPSK PYWEVDWSRR
TALILGNEGK GIHKKIQEAF NETITIPHSE IVESLNVACV AVPLLLERKR VAYTSK