Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_14981 |
Symbol | |
ID | 4718219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 1279617 |
End bp | 1280327 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640079219 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001009888 |
Protein GI | 123969030 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.348499 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGAAGT CTGGAAAAAA TCCTTCTAAG ATTTTAGTTA CTGAAAAATG GCTAAGAAAG AATCAAAATC TAAGCAAAAA ATTTGATGAG TCATTAATAA ATATTGTCTC AGAGGAAGTC TTGGCGTCAG CGATTTCAAC AATTAATCCA GATGGGATAG CAGCTTTAGT AGAGATTTCA GCAATACCTA ATTATCAATT TAATAGAAAA GATGATTTTG TTCTTGTTCT CGACAGAATT CAAGATCCTG GGAATATGGG TAATCTATTT AGAACCGCTT TAGCTGCGGG TGTTAATGCA ATTTTTTTAG CTGGAGGTGC GCACCCATTA GGCCAAAAGG TATTAAGAGC ATCCTCAGGT GCAGTTTTTC ATCTGCCATT TTTAAGATTT GATGGCATTG AAGAAGAAAT ATTAAATTCT TTACTTAATT CTTTGTCTGA ATTATCAAAT GTAGGATTTA AGATTTTCTC TACTAGTAGC CATAATGAGA GTACAAAAAA ACCTTCAAAA CCTTACTGGG AAGTTGATTG GTCTAGACGT ACAGCATTAA TTTTGGGTAA TGAAGGTAAA GGTATTCATA AAAAAATTCA AGAAGCTTTT AATGAAACAA TTACAATTCC GCATAGCGAG ATTGTAGAAT CATTGAATGT GGCTTGTGTT GCAGTTCCGT TATTACTTGA ACGAAAAAGA GTCGCATATA CCTCTAAATA A
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Protein sequence | MLKSGKNPSK ILVTEKWLRK NQNLSKKFDE SLINIVSEEV LASAISTINP DGIAALVEIS AIPNYQFNRK DDFVLVLDRI QDPGNMGNLF RTALAAGVNA IFLAGGAHPL GQKVLRASSG AVFHLPFLRF DGIEEEILNS LLNSLSELSN VGFKIFSTSS HNESTKKPSK PYWEVDWSRR TALILGNEGK GIHKKIQEAF NETITIPHSE IVESLNVACV AVPLLLERKR VAYTSK
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