| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_14881 |
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| Symbol | |
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| ID | 4718209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | - |
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| Start bp | 1269638 |
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| End bp | 1270579 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640079209 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001009878 |
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| Protein GI | 123969020 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTCAT CATTACCCAT ACAATCAGAA CCACCTAAAA GGAGGAGTAA TGATCCAATA
AGTTGGTATT TGCAAAATAT TGGTAGAGTT CCCTTATTAA CGCCTGCCGA AGAGATTGAA
TTGGGTAATC AAGTCCAGAA GATGATGATT CTTACAGAAG ATGGACAATT AAATGAAAAG
GTTAATGAAT TTACAACACA GCAAAAAAGA ACTATAAAAA TTGGACGAAG AGCTAAAGAA
AGAATGATGA AAGCTAATTT AAGATTAGTT GTCAGTGTGG CAAAAAAATA TCAAGGTAAA
GGACTGGAAT TACTTGATTT AGTTCAAGAA GGTTCTCTTG GGTTGGAGAG GGCTGTTGAA
AAATTTGATC CGACAAGAGG ATATAAGTTT TCTACTTATG CATTTTGGTG GATTAGGCAG
AGTATGACAA GAGCTATTGC ATGTCAATCA AGAACAATCC GTTTACCTGT TCACTTAAGT
GAAAGGTTGG CTTCTATCAG AAAAGTTAGT AGAGATTTGG CTCATAAGCT TGGTGCTATG
CCAAGCAGAA TTGAAATTGC AGAAGCAATG GAAATTGATG TAGAAGAATT GGATTCTGTT
TTGAGACAAG CCTTATCGAC AAGTAGTTTA GATGCCCCAG TAAATGGTGA TGATGGCAGG
AGCTTTTTAG GTGATTTGAT TGCAGATAGT AATAATGAAG AACCTCTAGA TCAAGTTGAA
CAAAAAATGC ATCAAGAGCA GCTTGGTAAA TGGTTAAGTC ATTTAAGCGA GCAAGAACAA
CATGTTCTCA AACTAAGGTT TGGACTTGAT GCAAATGAGA GACATACGCT TGCAGAAATT
GGAAGATTAT TAGAAGTTTC TAGAGAAAGA GTAAGACAAG TTGAACTTAA GGCACTAAGA
AAATTAAGGA ATTTAACCAG AAAATTACCT AGCGGTATTT AA
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| Protein sequence | MVSSLPIQSE PPKRRSNDPI SWYLQNIGRV PLLTPAEEIE LGNQVQKMMI LTEDGQLNEK
VNEFTTQQKR TIKIGRRAKE RMMKANLRLV VSVAKKYQGK GLELLDLVQE GSLGLERAVE
KFDPTRGYKF STYAFWWIRQ SMTRAIACQS RTIRLPVHLS ERLASIRKVS RDLAHKLGAM
PSRIEIAEAM EIDVEELDSV LRQALSTSSL DAPVNGDDGR SFLGDLIADS NNEEPLDQVE
QKMHQEQLGK WLSHLSEQEQ HVLKLRFGLD ANERHTLAEI GRLLEVSRER VRQVELKALR
KLRNLTRKLP SGI
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