| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_14311 |
|---|
| Symbol | |
|---|
| ID | 4718152 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. AS9601 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008816 |
|---|
| Strand | + |
|---|
| Start bp | 1203163 |
|---|
| End bp | 1206069 |
|---|
| Gene Length | 2907 bp |
|---|
| Protein Length | 968 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640079152 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001009821 |
|---|
| Protein GI | 123968963 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGG ATAAAGATAG TTACTTTAAA AATTTAGATC TTGATAAGGA GATAATTAAA
ATAATTGAAA AAGATATTTT TTTAGAGAAT TATTCAGTAG GTGAAGAAAT ATTCAATCCT
GAAATCACAA TTAATAAAGT TTCAATTATT TTATCTGGAA GTATTAGACA AATAAAAAGA
GATTCTACAA ATAATACCAA TATTTATAAA TATGTTAAAA ATGATTTTTT ATTTATTCCT
GAATTGATTT ATAAACTTAA AAATTCTTTT TACTATATAG CAGCAAATGA CTTGCAGTTA
ATATCTATTG AAAAGGAAAA ATTTTTAAAT TTATTAAAGG AAAATAATGA ATTTCGTAAA
TGGATAAATA ATCAAATCTT CAAAAATGAG AAAATTTCAA TTTTAAATAA ATTATTAAAG
GAGGAATTTA ATAACAATTT TGATAAAGAA CAACTTCTTA ATAATCTTTC AGAAAATATA
GACCTTGTTA ATGAGAAAAT TTTGAAAAAT ATTCAGGATA AAAAGATTGA TTCAAAAAAT
TTTGAAATTA TTTCAATTTC TAAATCAATT CACTTTGATT ACCTTGAAAA AATAAATTTC
GAGAAGATAT TAGGTTTAGA TTTTTCAGAA CTAGAAAGAT TAGTAATTAT TAATAATAAA
TTCAAGAAAT TTAAAATTCA TAAAAATAAA ATTCCCAAAG TAGATAAAAT TTCTCAAATG
GTTGAAGAAT CTATAGATGA ATCAAAAAAA GAATTACATT ATGCAGATAT AAATATTAAA
AAAAATGTTT GCAATAGGAA AGATAATGTT ATTGAATGTT TTAGGATTTT AAGTAAGTTA
ATTGATATTA ATTATCGAGT TGATCCAATA AGCAATTATT TAGATTTTCT TGATAAGAAT
AAAAAGAAAT ATACTTTTAG GAATTACGCA GAAATTGCTT ATGGATTAGG TTTAGAGGTA
TCTTGTGGAG AACTTAGCAT ATCGCAAGTA CTTAAGGTTA AAACGCCTTC ATTAATAATT
TATAAAAATG ATTTAGCTTT AGTAGTTAAT GCAGACAGAG AAAAACTGAC TCTAATTTAC
CCTGCAGATG GATTGATTAC TTTGTATAAA AATGATTTAG AGAAAATATA TGAGGGAAAT
ATTAACATCA TAAATATTTC AAAAAATCGT TTAACTCAAG AAAACAAATT CTCAATAAGT
TGGTTTATTC CAATTTTAAA AGAATATAAA AATACTTTAT TCCAAATTTT AATTTCAGGA
TTAGTTGTAC AAATATTTAT ATTGTCGAAT CCATTATTAA TTCAAGTAAT AATTGATAAG
GTTATATCGC AAAGAAGTCT AGATACACTA CAAGTATTAG GATTCGCACT ATTAGTAATT
ACAGTTATTG AAGCAGTATT ATCAAGTATA AAATCTTTTA TCCTTTCAGA AACTACTAAT
AGAATAGATC AAAAATTAGG AATTAAAATA ATTGATCATT TATTTAGATT ACCTCTTGAA
TATTATGACA AAAGATCTAT AGGAGAATTA TCTAATAGGG TAGGTGAACT TGAGAAAATT
AGGAACTTTT TGACTAGTCA AGGTATTAAT ACTTTTTTAG ATGCGTCATT TTCTTTATTT
TATATTTTCG TACTATTTTT ATATAGCGGT AAGCTTACAT TAATAGCTTT AAGTGTTATC
CCAATTCAGA TTTTAATTAC ATACTATGGA TCGCCACTTT TTAAAAAACA ATATCGGAAA
GCAGCTATTA ATAATGCAAA TACTCAAAGT TATTTAGTAG AAGTGCTATC TGGTATCCAA
ACGGTAAAAA CACAAAATGC AGAAACCTCA AGTCGCTGGA GATGGCAGAA TTACTATTCA
AAATTTATTA AGAGTACATA CCAAAAAACG ATTACAGCTG TTTCATTAAA TCAACTTACT
CAATCTCTGC AAAAAATTTC TCAATTAATA GTTTTATGGT ATGGAGCAAT AATGGTTTTA
AACGGTGAAT TTACTCTTGG TCAACTAATT GCATTTAGAA TCATTTCTGG ATATGTAACA
CAACCAATTT TAAGGTTGAG CACTATATGG CAACAGTACC AGGAAATAAA AATTAGTTTT
GAAAGATTGG GAGATATTGT TAATACTCCA AAAGAAAATG AATCAAAAGA TTTAGGAAAA
ATTCAACTGC CAAGTGTTGA GGGGAATATT TTATTTGATA ATGTATCATT TAAATTTATT
GGCGACTCCA AAACAACTCT GAATAAAATC AACTGTCAAA TTGATAAAAA TTCTTTTGTT
GGAATTGTTG GTAAAAGTGG AAGTGGTAAA AGTACATTTT GTAAATTAAT TTCTAGGCTT
TATGTACCTA ATGAGGGGTC TATTTTAATT GATAAATACG ATATCCAAAA GGTAGAAATA
AGTTCAATTA GAAGGCAATT AGGGATAGTT AGTCAAGACC CTTTACTTTT CGCTGGAACA
ATAAGAGATA ATATATGTTT TGGTGATGAA AGTTTTTCTG ATAAGGAGAT TGTAGAAGCA
TCAAAAATAT GTTGCGCCCA TGAATTTATT ATGGAACTTC CATTGGGATA CAATACAAAA
ATTTCTGAGA AAGGAAGTTC ATTAAGTGGG GGACAACGTC AGAGAATTGC ATTAGTAAGA
GCATTATTAA AAAAACCAAA AATAATTATC TTAGATGAAG CAACAAGTGC TTTAGATATA
GAAACTGAAC AACTATTTGT TAAAAATCTA TTAAATAAAT TTAAAAATTC AACAATAATA
ATTATTACGC ATAGATTATC TAACGTTATA AATGCAGATA AAATTCTTGT TTTTGAAAAA
GGTGACTTAT CTGAACAAGG AGATCATGAA TCACTTCTTA AAAACAAATC AGTATATTAT
TCACTCTTAA ATAATGAGGA AAAATAA
|
|---|
| Protein sequence | MNMDKDSYFK NLDLDKEIIK IIEKDIFLEN YSVGEEIFNP EITINKVSII LSGSIRQIKR
DSTNNTNIYK YVKNDFLFIP ELIYKLKNSF YYIAANDLQL ISIEKEKFLN LLKENNEFRK
WINNQIFKNE KISILNKLLK EEFNNNFDKE QLLNNLSENI DLVNEKILKN IQDKKIDSKN
FEIISISKSI HFDYLEKINF EKILGLDFSE LERLVIINNK FKKFKIHKNK IPKVDKISQM
VEESIDESKK ELHYADINIK KNVCNRKDNV IECFRILSKL IDINYRVDPI SNYLDFLDKN
KKKYTFRNYA EIAYGLGLEV SCGELSISQV LKVKTPSLII YKNDLALVVN ADREKLTLIY
PADGLITLYK NDLEKIYEGN INIINISKNR LTQENKFSIS WFIPILKEYK NTLFQILISG
LVVQIFILSN PLLIQVIIDK VISQRSLDTL QVLGFALLVI TVIEAVLSSI KSFILSETTN
RIDQKLGIKI IDHLFRLPLE YYDKRSIGEL SNRVGELEKI RNFLTSQGIN TFLDASFSLF
YIFVLFLYSG KLTLIALSVI PIQILITYYG SPLFKKQYRK AAINNANTQS YLVEVLSGIQ
TVKTQNAETS SRWRWQNYYS KFIKSTYQKT ITAVSLNQLT QSLQKISQLI VLWYGAIMVL
NGEFTLGQLI AFRIISGYVT QPILRLSTIW QQYQEIKISF ERLGDIVNTP KENESKDLGK
IQLPSVEGNI LFDNVSFKFI GDSKTTLNKI NCQIDKNSFV GIVGKSGSGK STFCKLISRL
YVPNEGSILI DKYDIQKVEI SSIRRQLGIV SQDPLLFAGT IRDNICFGDE SFSDKEIVEA
SKICCAHEFI MELPLGYNTK ISEKGSSLSG GQRQRIALVR ALLKKPKIII LDEATSALDI
ETEQLFVKNL LNKFKNSTII IITHRLSNVI NADKILVFEK GDLSEQGDHE SLLKNKSVYY
SLLNNEEK
|
|---|
| |