Gene A9601_13991 details

Gene Information

• Locus tag: A9601_13991
• Symbol: gmd
• ID: 4718120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 1168547
• End bp: 1169689
• Gene Length: 1143 bp
• Protein Length: 380 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640079120
• Product: gdpmannose 4,6-dehydratase
• Protein accession: YP_001009790
• Protein GI: 123968932
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1089] GDP-D-mannose dehydratase
• TIGRFAM ID: [TIGR01472] GDP-mannose 4,6-dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.193432
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAAAGA ATCAAAAAGT TGCTCTAATT ACTGGTATTA CCGGTCAAGA TGGCAGCTAT 
CTTGCGGAAT TTTTATTGAA TAAAGGTTAT ATAGTTCATG GAATAAAAAG AAGGTCCAGT 
AGTTTAAATA CTGAGAGAAT TGACCATATT TATCAAGATC CGCATTTAAG TAACCCCTCA 
TTGATATTGC ATTACGGAGA TTTAACTGAT AGTACAAACC TTATAAGAAT AATCAAATAT 
GTAAAGCCAG ATGAGATTTA CAATCTTGGG GCTCAAAGTC ATGTGAGTGT TAGCTTTGAA 
ACTCCAGAAT ACACAGCTAA CTGTGATGCG TTAGGGACCT TAAGAATATT AGAAGCAATT 
AGATTATTAA AACTTGAAAA AATTACTAAA TTTTATCAAG CTAGTACAAG CGAATTATAT 
GGTTTAGTGC AAGAAACCCC TCAAACTGAG AAAACACCTT TTTACCCTAG AAGTCCTTAT 
GGAGTAGCTA AACTTTACTC ATATTGGATA ACTGTAAATT ACAGAGAATC CTATGGAATA 
TTTGCTTGCA ATGGAATTCT TTTTAATCAT GAAAGTCCAA GAAGAGGAGA GACATTTGTT 
ACAAGAAAAA TAACAAGAGG ATTATCTCGA ATAGATCAGG GCTTAGAAAA TTGTATTTAT 
CTTGGTAATC TTGATGCATT AAGAGATTGG GGACATGCTG TTGATTATGT AGAAATGCAG 
TGGAAGATGT TACAGCAAAA AGACCCAAAA GATTATGTAA TTTCAACAGG CAGGCAGGAA 
AGTGTAAGAA GATTTATTCA TTTAGCAGCT TTGGCATTGG GGTGGAAAAC AAATGCAGAG 
AATAATGCTA TTGTTTGGGA GGGTTCAGGA TTAGATGAAG TAGGAAGAAG AGTTGATACA 
AATGAAATTA TTATAAGGAT TGATCCAAAA TATTTCAGAC CATCAGAAGT TGAAACACTC 
CTTGGAGATT CTTCAAAAGC ATATGAAGAA CTTAATTGGA AACCAAAAAT AAGTTTAGAA 
GAGCTTATAA AAGAAATGAT AAATGCAGAT ATTGAGTTAG CAAAAAAAGA AGCTTTTTTA 
TTTAGAAAAG GATTTAACAT CCCTAAATCA ATTGAAAACC CTCCGAGCAT TTTTGAAAAA 
TAA 

 

Protein sequence

MIKNQKVALI TGITGQDGSY LAEFLLNKGY IVHGIKRRSS SLNTERIDHI YQDPHLSNPS 
LILHYGDLTD STNLIRIIKY VKPDEIYNLG AQSHVSVSFE TPEYTANCDA LGTLRILEAI 
RLLKLEKITK FYQASTSELY GLVQETPQTE KTPFYPRSPY GVAKLYSYWI TVNYRESYGI 
FACNGILFNH ESPRRGETFV TRKITRGLSR IDQGLENCIY LGNLDALRDW GHAVDYVEMQ 
WKMLQQKDPK DYVISTGRQE SVRRFIHLAA LALGWKTNAE NNAIVWEGSG LDEVGRRVDT 
NEIIIRIDPK YFRPSEVETL LGDSSKAYEE LNWKPKISLE ELIKEMINAD IELAKKEAFL 
FRKGFNIPKS IENPPSIFEK