| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_12071 |
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| Symbol | srmB |
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| ID | 4717921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | - |
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| Start bp | 1022636 |
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| End bp | 1024417 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 640078923 |
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| Product | putative ATP-dependent RNA helicase |
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| Protein accession | YP_001009598 |
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| Protein GI | 123968740 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTA AAAAAGATAG TAACTCTCTT GGTAGTGAGC AGGAGAATTT TCATAATGAA
GATTCTCCCC TACTAGAGTC TAAGAACTTA GAAAACAAAA AAGAAATTGA ATCTCAATTA
TTGGAAGTAT CGAAAGAAAA TGATAATGAG AATGGATTTC TCGATTTTGG GTTTAATCAA
TCAATCTTAA ACTCGTTAAT AAATAAAGGA TATAAAAATC CAACTCCCAT CCAAAAAGCT
GCAATTCCCG AACTAATGTT AGGTAGGGAT TTACTGGGCC AAGCACAAAC AGGAACAGGA
AAGACTGCAG CTTTCGCATT ACCATTAATA GAAAAACTTA CAGATAATAA AGAATTAAAT
GCCAAGGTTT TAGTTATGAC TCCTACAAGA GAATTAGCAA CTCAAGTGGC AGAATCTTTT
AAAAGTTATA GTTCTGAATC TAGTAATTTT AAGACGGTTG CAATATATGG AGGCACCGAC
TATCGAAATC AAATTTCTGC ATTGAAAAGA AAAGTTGACG TAGTAGTTGG TACACCAGGC
CGAATAATGG ATCATATAAG ACAGGGGACT TTTAAAATTA AAGATATAAA TTGTCTTGTT
TTAGATGAGG CAGATGAAAT GTTAAATATG GGTTTTCTTG AGGATATTGA ATGGATAATA
GATCAACTTC CGGAAAATAA GCAAATGGTA TTGTTTTCAG CAACAATGCC TAGTGAGATA
AGAAATATAG CAAAAAAATA TCTAAATGAT CCCGCCGAAA TATTAATCAA AAGTGTCAAA
AAAGAAACTC AATTAATTTC GCAAAAATTT CTATATGTAC AAAGGCATCA TAAGTTAGAT
GCTTTAAAAA GAATACTAGA ACTTAATAAC GAGGGAGTAA TTATTTTTGT GAGGACAAAA
CTACTTACTA CTTCAATAGC TGAAGCTTTA GAGAATTCAG GCCATACTGT GGCAGTACTT
AATGGAGATA TACCTCAAAA TCAAAGAGAA AATACTGTAG ATAGATTGAA AAAAGGATTT
ATTAATATCC TTGTTGCAAC TGATGTCGCA GCTAGAGGAT TAGATGTTGA GAGGATAAAA
CTTGTTGTTA ATTACGATTT TCCTTTTGAC AAGGAAACAT ATACTCATAG AATTGGAAGA
ACTGGAAGGG CAGGCAGATC TGGAGAAGCA ATTTTATTTG TTAATCAAAG AGAAAAACAT
TTTCTAAGAA ACTTAGAAAA CTCAACAAGA ACAAAGATTG AAGAAATTAA CATACCAAGT
AATAAAATAA TAAATGAAAA AAGGATGGAG AAACTTATAG ATAATGTTAA TGAGAGTTTT
TTAGCTAAAG ATGAAAATGA AGAAAATAAA GCTTTGATTA TTGATGTACT AGATAATTTA
AAAGAAAAAT ACTCTATGGA TGAATCAAAT ATTGCAATGG CGGCGATTAA TTTAGTAATA
GGTAATAAAT CATTTTTTGT TGATGAAGAT GATTCTTGGA TTAATAAACA AAATAATACT
GATCGAAATA GATCAAATAG AAATAGTAAT AATCGTATGA GAAATTCAAA TAGAAGAAAT
AATTATCAAA ATGATTCTTT TGAAACCTAT AAATTTAACT TTGGTAAATT TGATGGAGTT
AGAGTTGCAA ATATTATATC CTCAATCTGT AATTCAACTA ATATAAATGG TAGATCCATA
GGTAAGATAC AGATTTTTAA TGATTACAGT TTGGTAGATT TACCCAGAGA TCTGCATAGA
GAAACTAAAA ATAAATTAAA AAAAATTAAA CTCAGAAACT AG
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| Protein sequence | MAFKKDSNSL GSEQENFHNE DSPLLESKNL ENKKEIESQL LEVSKENDNE NGFLDFGFNQ
SILNSLINKG YKNPTPIQKA AIPELMLGRD LLGQAQTGTG KTAAFALPLI EKLTDNKELN
AKVLVMTPTR ELATQVAESF KSYSSESSNF KTVAIYGGTD YRNQISALKR KVDVVVGTPG
RIMDHIRQGT FKIKDINCLV LDEADEMLNM GFLEDIEWII DQLPENKQMV LFSATMPSEI
RNIAKKYLND PAEILIKSVK KETQLISQKF LYVQRHHKLD ALKRILELNN EGVIIFVRTK
LLTTSIAEAL ENSGHTVAVL NGDIPQNQRE NTVDRLKKGF INILVATDVA ARGLDVERIK
LVVNYDFPFD KETYTHRIGR TGRAGRSGEA ILFVNQREKH FLRNLENSTR TKIEEINIPS
NKIINEKRME KLIDNVNESF LAKDENEENK ALIIDVLDNL KEKYSMDESN IAMAAINLVI
GNKSFFVDED DSWINKQNNT DRNRSNRNSN NRMRNSNRRN NYQNDSFETY KFNFGKFDGV
RVANIISSIC NSTNINGRSI GKIQIFNDYS LVDLPRDLHR ETKNKLKKIK LRN
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