Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_11981 |
Symbol | uppS |
ID | 4717912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 1015117 |
End bp | 1015920 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640078914 |
Product | undecaprenyl pyrophosphate synthase |
Protein accession | YP_001009589 |
Protein GI | 123968731 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAG GAAAAATAAT TGACGCGAAA AATAATAACT TATCCATGAA AATAGATAAG CAAAAAGTTC CAGAACATGT TGCAATAATA ATGGACGGCA ATGGTAGATG GGCAACAAAA AAAGGGTTCC CTCGCACATA TGGGCATAAA AAAGGCGTTA GTGTTTTAAA GGAGATTCTC AAAGCATCAA AAAAATTAGG ATGTAAAGTA CTAACTGTTT ACGCTTTTTC AACAGAGAAT TGGACAAGAC CAACAAAAGA AGTTGACTTC CTCATTAATC TTTTTATCGA AGTTTTGAGA AATGAAATTA GAGAGATACA TGAAGAATCA ACAAAAATAA AATTCATTGG AGATATAACC CCTTTCCCAG AAAATCTAAA AAAAATAATA TCTAATTCAG AATCTCTAAC TAAAAACAAC AATAAATTTT TATTGAATGT TTGTGTTAAC TACGGTGGTA GACAAGAAAT AGTAAAAGTT GCAAAAGAAT TAGCATTAAA ATCTTCTTCT GGCGAAATAA AACCAAGTGA GGTTAATGAA GAATTATTTA ATTCAGAGCT ATTAACTCGA GGAATTAAAG ATCCAGAATT ACTAATAAGA ACCAGTGGAG AAAAAAGGAT AAGTAATTTT CTTTTATGGC AATTAGCTTA TTCAGAAATT TATATATCTG ACGTAATGTG GCCTGACTTC AATGAGTTTG AATTTCTAAA AGCAATCATT GATTACCAAT CGAGGAATAG ACGTTTCGGA GGTATAGAAT CATTACCAAA TGAATCTTTT GAAGATTCTC ATTATACTCT CTAA
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Protein sequence | MSLGKIIDAK NNNLSMKIDK QKVPEHVAII MDGNGRWATK KGFPRTYGHK KGVSVLKEIL KASKKLGCKV LTVYAFSTEN WTRPTKEVDF LINLFIEVLR NEIREIHEES TKIKFIGDIT PFPENLKKII SNSESLTKNN NKFLLNVCVN YGGRQEIVKV AKELALKSSS GEIKPSEVNE ELFNSELLTR GIKDPELLIR TSGEKRISNF LLWQLAYSEI YISDVMWPDF NEFEFLKAII DYQSRNRRFG GIESLPNESF EDSHYTL
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