Gene A9601_11511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_11511 
Symbol 
ID4717864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp965746 
End bp966975 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content30% 
IMG OID640078866 
Productmajor facilitator superfamily multidrug-efflux transporter 
Protein accessionYP_001009542 
Protein GI123968684 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.852941 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTAGTC CAAATAGTTT ACAAATTAGC AAAAATTGGT GGATTCAATT TCCTTATCAT 
TTGAGGTTAA TAACTAAGAT AAGATTTTTC GCTGCATTTG GAGCAGGAGG TGTTATTTAT
TTAACATCAC TTATTTTTAA TAACCTAGGA TTATCGGCGA CAGATATTGG CCTGGGATTT
ACCATTTCAG CAATAATTGG AACCGTAACA AGACTCTTTA CAGGTAATTA TCTTAATAAA
ACGGGAAAAA TACAATTTCC GATAATTACT TCTTCAATAC TAAGTATTGC CGCTAGCTTA
TGCCTCATTT TTTCAAGAGA TACTTTTTTG TACATAATTG GGCAATCACT TGTTGGGGCT
GCTGCAGGAA TATATTGGCC TGCTGCCGAG TTTGGGGTGC CCTATTTTTG TCATCCTATC
GAAACACGTA AAGCTTATGC CCTTGTTAGA AGTTCGGAAG CTTTAGGAAT ATTTCTAGGG
GTATTCTTAG GAGGGTATAT GACAAATTTT TTGTATTTTA AATCAATATT TATAAATGAT
ATATTTTGCA TGTTAGTTAT CACGTATTTA ATATCTAGAA ATAGTTCTTC TATAAAAAGA
AACTTAGAAA ATTTTCAAAA AAAATTAGTA GATCCAATTA ATCAGGGACA ATTGAAATGG
AATAAAAATT CAACAATAAT AATTTTATCT ATTTTATTGA TAACTACCTC TTTAGCCCTT
ATACAAGTAA CTTTGCCTCT GGATCTTGTT AAAGGTGGAG TATATCGTAA TGCATTAAAC
AAAGAAATTA TTAGTCTTAT AATTTCTATT CAGTTAATTT TATTGTTGTT TTTACAATGG
CCTATCGGTT CTTGGATATC TAAGAAAGAA AGATTATTTG GCTTGAAATT TAGTTTAATA
AATTTCTCTT TCGCTTCATT TTTATTATTT ATTTCTAGTT ATTTAAATAT CCCAGCGTTT
TATTTAATTT CTTTGGCATT AATTTTAGTA AGTTTAGGGA CTGCTTCATT TCTTCCAACA
TCAACAGATG TCGTTTTCAG AATAGCTCCT TCAAATAAAA AAGGTTTTGC ACTCGCTTTA
TTATCACAAT GTTTCGCTAT GGGTTATTTT TTCGGACCAT TTATTTCAGG ACGCATATTA
GATCTATTTG GTTATGCTTC ATTAATCTGG CTTTCAATTT CTTGTTGTTG CTTTATTGCC
TTTACAATTC TATTTAAGAG ATTATTTTAA
 
Protein sequence
MISPNSLQIS KNWWIQFPYH LRLITKIRFF AAFGAGGVIY LTSLIFNNLG LSATDIGLGF 
TISAIIGTVT RLFTGNYLNK TGKIQFPIIT SSILSIAASL CLIFSRDTFL YIIGQSLVGA
AAGIYWPAAE FGVPYFCHPI ETRKAYALVR SSEALGIFLG VFLGGYMTNF LYFKSIFIND
IFCMLVITYL ISRNSSSIKR NLENFQKKLV DPINQGQLKW NKNSTIIILS ILLITTSLAL
IQVTLPLDLV KGGVYRNALN KEIISLIISI QLILLLFLQW PIGSWISKKE RLFGLKFSLI
NFSFASFLLF ISSYLNIPAF YLISLALILV SLGTASFLPT STDVVFRIAP SNKKGFALAL
LSQCFAMGYF FGPFISGRIL DLFGYASLIW LSISCCCFIA FTILFKRLF