Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_11511 |
Symbol | |
ID | 4717864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 965746 |
End bp | 966975 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640078866 |
Product | major facilitator superfamily multidrug-efflux transporter |
Protein accession | YP_001009542 |
Protein GI | 123968684 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.852941 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTAGTC CAAATAGTTT ACAAATTAGC AAAAATTGGT GGATTCAATT TCCTTATCAT TTGAGGTTAA TAACTAAGAT AAGATTTTTC GCTGCATTTG GAGCAGGAGG TGTTATTTAT TTAACATCAC TTATTTTTAA TAACCTAGGA TTATCGGCGA CAGATATTGG CCTGGGATTT ACCATTTCAG CAATAATTGG AACCGTAACA AGACTCTTTA CAGGTAATTA TCTTAATAAA ACGGGAAAAA TACAATTTCC GATAATTACT TCTTCAATAC TAAGTATTGC CGCTAGCTTA TGCCTCATTT TTTCAAGAGA TACTTTTTTG TACATAATTG GGCAATCACT TGTTGGGGCT GCTGCAGGAA TATATTGGCC TGCTGCCGAG TTTGGGGTGC CCTATTTTTG TCATCCTATC GAAACACGTA AAGCTTATGC CCTTGTTAGA AGTTCGGAAG CTTTAGGAAT ATTTCTAGGG GTATTCTTAG GAGGGTATAT GACAAATTTT TTGTATTTTA AATCAATATT TATAAATGAT ATATTTTGCA TGTTAGTTAT CACGTATTTA ATATCTAGAA ATAGTTCTTC TATAAAAAGA AACTTAGAAA ATTTTCAAAA AAAATTAGTA GATCCAATTA ATCAGGGACA ATTGAAATGG AATAAAAATT CAACAATAAT AATTTTATCT ATTTTATTGA TAACTACCTC TTTAGCCCTT ATACAAGTAA CTTTGCCTCT GGATCTTGTT AAAGGTGGAG TATATCGTAA TGCATTAAAC AAAGAAATTA TTAGTCTTAT AATTTCTATT CAGTTAATTT TATTGTTGTT TTTACAATGG CCTATCGGTT CTTGGATATC TAAGAAAGAA AGATTATTTG GCTTGAAATT TAGTTTAATA AATTTCTCTT TCGCTTCATT TTTATTATTT ATTTCTAGTT ATTTAAATAT CCCAGCGTTT TATTTAATTT CTTTGGCATT AATTTTAGTA AGTTTAGGGA CTGCTTCATT TCTTCCAACA TCAACAGATG TCGTTTTCAG AATAGCTCCT TCAAATAAAA AAGGTTTTGC ACTCGCTTTA TTATCACAAT GTTTCGCTAT GGGTTATTTT TTCGGACCAT TTATTTCAGG ACGCATATTA GATCTATTTG GTTATGCTTC ATTAATCTGG CTTTCAATTT CTTGTTGTTG CTTTATTGCC TTTACAATTC TATTTAAGAG ATTATTTTAA
|
Protein sequence | MISPNSLQIS KNWWIQFPYH LRLITKIRFF AAFGAGGVIY LTSLIFNNLG LSATDIGLGF TISAIIGTVT RLFTGNYLNK TGKIQFPIIT SSILSIAASL CLIFSRDTFL YIIGQSLVGA AAGIYWPAAE FGVPYFCHPI ETRKAYALVR SSEALGIFLG VFLGGYMTNF LYFKSIFIND IFCMLVITYL ISRNSSSIKR NLENFQKKLV DPINQGQLKW NKNSTIIILS ILLITTSLAL IQVTLPLDLV KGGVYRNALN KEIISLIISI QLILLLFLQW PIGSWISKKE RLFGLKFSLI NFSFASFLLF ISSYLNIPAF YLISLALILV SLGTASFLPT STDVVFRIAP SNKKGFALAL LSQCFAMGYF FGPFISGRIL DLFGYASLIW LSISCCCFIA FTILFKRLF
|
| |