| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_10981 |
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| Symbol | |
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| ID | 4717809 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | + |
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| Start bp | 938171 |
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| End bp | 939178 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640078813 |
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| Product | nitrogen regulation protein NifR3 family-like protein |
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| Protein accession | YP_001009489 |
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| Protein GI | 123968631 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family
[TIGR00742] tRNA dihydrouridine synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTCAA ATATAAGGCT AAAAGGAAGG GGAGTTAACA GAAAAATTAC GAGTAAGGTA
ATGCTATCGC CATTAGCAGG AGTTACGGAT AACATTTTTA GACGACTTGT ACGTAAATGG
GCTCCAAACT CTTTACTTTT TACAGAAATG ATAAATGCCA CAAGTCTTAA AAAAGGATAT
GGCACACAAA AAATCAATCA AATAGATTTA GAAGAAGGTC CAATTGGAGT ACAAATATTT
GATAATAGGC CATATGCTGT TTCTGAAGCT GCAAAACAAG CTGAGGACTC TGGAGCTTTC
TTAATCGATA TAAATATGGG ATGTCCAGTA AAAAAAATTG CAAAGAAAGG TGGAGGCAGT
GCCTTAATTA AAGACCGAAA ACTTGCTATA GAATTAGTCA AAAATGTTGT AAAAGCTGTT
AGGGTTCCTG TAACAGTAAA AACACGACTC GGATGGGATA GTAAAGAAGA AAATATAGAG
GATTTCTTAT TTAAACTTCA AGATGCGGGA GCAACCATGA TCACACTTCA TGGAAGAACT
AGAAAACAGG GTTTTTCAGG CAAGTCAGAT TGGGAAATGA TCGGGAGACT TAAAAAGTTG
TTGGAAATTC CAGTAATTGC TAATGGAGAT ATCAAAAATC CAGATGACGC TCTTAATTGT
TTGAAAAAAA CAAAAGCTGA TGGTGTAATG ATTGGACGAG GAATTTTAGG ATCCCCATGG
AAAATAGGAG AAATAGATTA TGCTCTTAGA GAAAATAAAA ATTTTAAAGA ACCAAACACA
GAAGAAAAAC TATATTTAAT TATTGAGCAT CTTGATGAAT TAATAAAAGA AAAAGGAGAT
CACGGTTTGC TAATCGCAAG GAAACATATC TCATGGACAT GCAAAGACTT TAAAGGGGCA
TCAAATTTGA GAAATAACTT GGTTAGAGCT GTTGATAAAA ATGAAGTTAA AAATTTAATA
AATAAAATGA TTCAAACTTT GAATAATGAA AAAAATAGAT TAGCTTAA
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| Protein sequence | MSSNIRLKGR GVNRKITSKV MLSPLAGVTD NIFRRLVRKW APNSLLFTEM INATSLKKGY
GTQKINQIDL EEGPIGVQIF DNRPYAVSEA AKQAEDSGAF LIDINMGCPV KKIAKKGGGS
ALIKDRKLAI ELVKNVVKAV RVPVTVKTRL GWDSKEENIE DFLFKLQDAG ATMITLHGRT
RKQGFSGKSD WEMIGRLKKL LEIPVIANGD IKNPDDALNC LKKTKADGVM IGRGILGSPW
KIGEIDYALR ENKNFKEPNT EEKLYLIIEH LDELIKEKGD HGLLIARKHI SWTCKDFKGA
SNLRNNLVRA VDKNEVKNLI NKMIQTLNNE KNRLA
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