Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_09731 |
Symbol | dapF |
ID | 4717683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 842035 |
End bp | 842895 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640078687 |
Product | diaminopimelate epimerase |
Protein accession | YP_001009364 |
Protein GI | 123968506 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.137092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATA TAAGTTTTGA AAAATATCAA GGTAACGGAA ATGATTTCGT AATAATAGAT TCTAGAGGAA ATGAATTATA TAAAAATTAC AAGACAAATA AAATATTTGA TATAAAAAAA ATTTGCAACA GGCAATTTGG TGTTGGAGCA GATGGTGTGA TTTTTATAGA AGAACCTAAT GAAGATAATT ATGCAAAAAT GATAATTTTT AATTCTGATG GTTCTGAAGC ACAAATGTGT GGAAACGGAA TTAGGTGTTT AGTTGAGTAT CTCCACGTAA ATGATTCAAT GAATAATGAA AATATAGAAT ATAAAATTGA GACTAAAGCA GGTTTAAAAA TTGCAAAATA TATAAATGAT GAAATTACAG TTAAAATGGG AGTCCCTATT TTAGAAGGTC AAAATATTCC AACAACAATT GAAAAAAAAA TAAATTCAAT TCCTTCACAC GAATTTATTG AGAAAGATTT TAGTAATATG GGTTATGCCG TAGGAATGGG AAATCCTCAT TTAATATTCT TTGTAAAAGA CATAGAGTCA ATTGTTCTTT CCAGACTTGG TCCTATATTT GAAAAAAATG AATTATTTCC TGAAAAAACT AATGTACATT TTTGTCAAAT TTTAAATAGA GATAATATAA AAGTAAAAGT ATGGGAAAGA GGTGCAGGAC CAACCTTAGC TTGTGGAACA GGTGCCTGTG CTATCCATGT GGCAGCTTAT AAATTAGGCC TTTGTAATTC ACAAACCATA GTAACCTTAC CAGGAGGTAA TCTTAAAATT GATTGGTCAG AAGACGATTG TGAAGTAATG ATGACCGGTA ATGCTAAAAA GGTTTTCTCA GGATCAATTT TAGTAAATTA A
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Protein sequence | MKNISFEKYQ GNGNDFVIID SRGNELYKNY KTNKIFDIKK ICNRQFGVGA DGVIFIEEPN EDNYAKMIIF NSDGSEAQMC GNGIRCLVEY LHVNDSMNNE NIEYKIETKA GLKIAKYIND EITVKMGVPI LEGQNIPTTI EKKINSIPSH EFIEKDFSNM GYAVGMGNPH LIFFVKDIES IVLSRLGPIF EKNELFPEKT NVHFCQILNR DNIKVKVWER GAGPTLACGT GACAIHVAAY KLGLCNSQTI VTLPGGNLKI DWSEDDCEVM MTGNAKKVFS GSILVN
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