Gene A9601_09481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_09481 
SymbolsalY 
ID4717656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp815872 
End bp817104 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content33% 
IMG OID640078661 
Productputative ABC transporter 
Protein accessionYP_001009339 
Protein GI123968481 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTAGGA ATATTTCAAT AAAAGAAGCC TTAGGCATGG CAACAAAAAC TTTAGTTTCG 
AACAAATTGA GAAGTTCGCT AACAATGCTT GGAATAATTA TAGGAAATGC CTCAGTTATT
ACACTTGTTG GACTTGGTAG AGGTGCTCAA ACATTAGCAA AAAACCAATT AAGTAATTTA
GGCGCCAATG TTTTATTCAT TGTTCCCGGA AATAATGACA CAAGAAGAAG AGGTATTTCA
TTTCCTAAAA ACTTAGTTTT AGAAGATGCA ATAGCAATAA GAAATCAAGT CCCAACAGTT
AAAAAAGTAG CCCCTCAAAT CTCTGCTAAC GAAATAGTGC AATCAAATTC TAAAAGTTTA
AATATATCAA TTGCTGGAGT TACTCCTGAA TTTCTTGAAG TAAGAAGCTT TGAAGTAGAT
AAAGGTAGAT TTTTATCAAA AAGTGATGTT AATAGTGCAA GAAGTTATGT TGTGATAGGA
CCTGATCTGA AAGAGGAATT TTTCAAAGAT AAATCTTCAT CACTTGGAAA AAAAATCAGA
ATTAAAGACC ATACTTATGA AATTATCGGA ATATTAAAGC CCAAAGGTGC TGTATTTGGG
AGCAATCAAG ACAAAAATGC TTATATTCCA TTAACCACCA TGGTAAATAG GATTACAGGG
AAGGACCCGA CATATGGAGT AAGTTTAAGC TTCATTAGTG TTGAAGCGAT AAATAAAAAT
GCAACTAGTG CCGCTAAATT TCAGATTACT AACTTATTAA GGCAAAGACA TAAAATAATC
AGAGATGATG ACTTTGCGGT TAGATCACAA GAAGATGCGC TGAACATAGT AACCAACATA
ACAAGTGGAC TAACTTTTTT ACTGGCTGGT ATTGGTGCAG TATCTTTAGT GGTTGGAGGC
ATAGGAATCA TGAATATTAT GCTCGTTTCT GTAAGCGAAA GGACTGAAGA GATTGGACTT
AGAAAAGCAA TAGGAGCTAA ACAGTCAGAT ATATTAATTC AATTTTTAAT TGAGGCATTG
ATTTTATCTA CAATTGGAGG ATTAATTGGA ACAACAACAG GATTATCAGG TGTTTTTCTT
TTATCTCTGA TAACACCACT TCCTGCATCG GTGGGAATTA CAACTACTTT TTCCACCATG
ATCATTTCAG GATCAATAGG TTTAATCTTT GGCGTTTTAC CTGCTAAAAG AGCTTCTAAA
TTAGATCCAA TTGTTGCATT AAGAAGTTTA TAA
 
Protein sequence
MSRNISIKEA LGMATKTLVS NKLRSSLTML GIIIGNASVI TLVGLGRGAQ TLAKNQLSNL 
GANVLFIVPG NNDTRRRGIS FPKNLVLEDA IAIRNQVPTV KKVAPQISAN EIVQSNSKSL
NISIAGVTPE FLEVRSFEVD KGRFLSKSDV NSARSYVVIG PDLKEEFFKD KSSSLGKKIR
IKDHTYEIIG ILKPKGAVFG SNQDKNAYIP LTTMVNRITG KDPTYGVSLS FISVEAINKN
ATSAAKFQIT NLLRQRHKII RDDDFAVRSQ EDALNIVTNI TSGLTFLLAG IGAVSLVVGG
IGIMNIMLVS VSERTEEIGL RKAIGAKQSD ILIQFLIEAL ILSTIGGLIG TTTGLSGVFL
LSLITPLPAS VGITTTFSTM IISGSIGLIF GVLPAKRASK LDPIVALRSL