Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_09481 |
Symbol | salY |
ID | 4717656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | - |
Start bp | 815872 |
End bp | 817104 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640078661 |
Product | putative ABC transporter |
Protein accession | YP_001009339 |
Protein GI | 123968481 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAGGA ATATTTCAAT AAAAGAAGCC TTAGGCATGG CAACAAAAAC TTTAGTTTCG AACAAATTGA GAAGTTCGCT AACAATGCTT GGAATAATTA TAGGAAATGC CTCAGTTATT ACACTTGTTG GACTTGGTAG AGGTGCTCAA ACATTAGCAA AAAACCAATT AAGTAATTTA GGCGCCAATG TTTTATTCAT TGTTCCCGGA AATAATGACA CAAGAAGAAG AGGTATTTCA TTTCCTAAAA ACTTAGTTTT AGAAGATGCA ATAGCAATAA GAAATCAAGT CCCAACAGTT AAAAAAGTAG CCCCTCAAAT CTCTGCTAAC GAAATAGTGC AATCAAATTC TAAAAGTTTA AATATATCAA TTGCTGGAGT TACTCCTGAA TTTCTTGAAG TAAGAAGCTT TGAAGTAGAT AAAGGTAGAT TTTTATCAAA AAGTGATGTT AATAGTGCAA GAAGTTATGT TGTGATAGGA CCTGATCTGA AAGAGGAATT TTTCAAAGAT AAATCTTCAT CACTTGGAAA AAAAATCAGA ATTAAAGACC ATACTTATGA AATTATCGGA ATATTAAAGC CCAAAGGTGC TGTATTTGGG AGCAATCAAG ACAAAAATGC TTATATTCCA TTAACCACCA TGGTAAATAG GATTACAGGG AAGGACCCGA CATATGGAGT AAGTTTAAGC TTCATTAGTG TTGAAGCGAT AAATAAAAAT GCAACTAGTG CCGCTAAATT TCAGATTACT AACTTATTAA GGCAAAGACA TAAAATAATC AGAGATGATG ACTTTGCGGT TAGATCACAA GAAGATGCGC TGAACATAGT AACCAACATA ACAAGTGGAC TAACTTTTTT ACTGGCTGGT ATTGGTGCAG TATCTTTAGT GGTTGGAGGC ATAGGAATCA TGAATATTAT GCTCGTTTCT GTAAGCGAAA GGACTGAAGA GATTGGACTT AGAAAAGCAA TAGGAGCTAA ACAGTCAGAT ATATTAATTC AATTTTTAAT TGAGGCATTG ATTTTATCTA CAATTGGAGG ATTAATTGGA ACAACAACAG GATTATCAGG TGTTTTTCTT TTATCTCTGA TAACACCACT TCCTGCATCG GTGGGAATTA CAACTACTTT TTCCACCATG ATCATTTCAG GATCAATAGG TTTAATCTTT GGCGTTTTAC CTGCTAAAAG AGCTTCTAAA TTAGATCCAA TTGTTGCATT AAGAAGTTTA TAA
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Protein sequence | MSRNISIKEA LGMATKTLVS NKLRSSLTML GIIIGNASVI TLVGLGRGAQ TLAKNQLSNL GANVLFIVPG NNDTRRRGIS FPKNLVLEDA IAIRNQVPTV KKVAPQISAN EIVQSNSKSL NISIAGVTPE FLEVRSFEVD KGRFLSKSDV NSARSYVVIG PDLKEEFFKD KSSSLGKKIR IKDHTYEIIG ILKPKGAVFG SNQDKNAYIP LTTMVNRITG KDPTYGVSLS FISVEAINKN ATSAAKFQIT NLLRQRHKII RDDDFAVRSQ EDALNIVTNI TSGLTFLLAG IGAVSLVVGG IGIMNIMLVS VSERTEEIGL RKAIGAKQSD ILIQFLIEAL ILSTIGGLIG TTTGLSGVFL LSLITPLPAS VGITTTFSTM IISGSIGLIF GVLPAKRASK LDPIVALRSL
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