Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_09271 |
Symbol | ksgA |
ID | 4717634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 797422 |
End bp | 798246 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 25% |
IMG OID | 640078640 |
Product | dimethyladenosine transferase |
Protein accession | YP_001009318 |
Protein GI | 123968460 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATTCTA AAAACCATCA TCAAAAAAAA AGATTTGGAC AACACTGGTT GGTAAATAAA AAAATATTAG AAAAAATCAA AGAAATTGCT GTTCTTAATC AAAATGACTT TATTTTAGAA ATTGGCCCAG GTAAAGGAGC TTTAACATCT AAGTTATTAG ATTCAGAAAT TAAAAAATTA CATGCGATTG AATTAGATAA AGATTTAATA AATTTATTGA ATGATAAATT CAATAATAAT GATAAGTTTT CACTTCAGCA GGGAGATATT CTTACCGTAA ATTTAGATTC AATTAATAAA AAGATTACAA AAGTGATTGC AAATATTCCT TACAATATAA CTGGCCCAAT ATTGGATATT TTCATAGGGA GATTGGGTAT TACAAGAAAC TATAATTACG AAAAAATAAT TTTTTTAATG CAGAAAGACG TTGTAGATAG GATTTTGTCT AAAGAAGGAA GTCCCAATGC TGGTGCGCTT AGTGTAAGAA TGCAACTCTT ATCAAAAATA AAAAAAATTT GTGATGTACC GCCTTCATCT TTTAGTCCAC CTCCAAAAGT TTTTTCTTCT TTAGTAGTTT TCGAACCAAT TAAAAATCAT TTAAGATTAG ATATTAGTAT AGAAAAAAAT ATAGATAAAC TTCTTCGAAT TTCATTTAAT TCAAGAAGAA AAATGCTTAG AAATACACTT AATTCAATAC TTTCAAATGA AGAGATAAAT GAATTATCTG AATCTTCAAA AGTTTGTTTT AATTTAAGAC CACAAGATAT TTCTATTGAA CAATGGATTA AGCTTGCAGA AAATTGTATT AAAATTAAAA AATAA
|
Protein sequence | MNSKNHHQKK RFGQHWLVNK KILEKIKEIA VLNQNDFILE IGPGKGALTS KLLDSEIKKL HAIELDKDLI NLLNDKFNNN DKFSLQQGDI LTVNLDSINK KITKVIANIP YNITGPILDI FIGRLGITRN YNYEKIIFLM QKDVVDRILS KEGSPNAGAL SVRMQLLSKI KKICDVPPSS FSPPPKVFSS LVVFEPIKNH LRLDISIEKN IDKLLRISFN SRRKMLRNTL NSILSNEEIN ELSESSKVCF NLRPQDISIE QWIKLAENCI KIKK
|
| |