Gene A9601_08861 details

Gene Information

• Locus tag: A9601_08861
• Symbol: urtC
• ID: 4717592
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 761266
• End bp: 762396
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640078598
• Product: putative membrane protein of urea ABC transport system
• Protein accession: YP_001009277
• Protein GI: 123968419
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG4177] ABC-type branched-chain amino acid transport system, permease component
• TIGRFAM ID: [TIGR03408] urea ABC transporter, permease protein UrtC

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTTAA GTAAAATTAA ATTTGATAAA AAAATAGTAT TATCATTTTG GATAATATTA 
ATAGCCTTAA TTATTGCAGC ACCAACTATA CTCCCTGTAT TTAGACTAAA CCTTTTAGGT 
AGATACTTAT CATTATCCAT AGTTGCACTT GGTGTTGATC TTATCTGGGG ATATACAGGT 
TTACTAAGTC TTGGACAAGG TATATTTTTT GCACTAGGTG GATATTGTGC AGCAATGTAT 
TTGCAAATAA CCAGCTCCTC TGAATTTCCA AATAATATTC CTGAATTTTT TGCTTTATAT 
GGTGTTGAAA AATTACCTTT TTTCTGGGAA CCGTTTAGAT CGCCTGTTTT TACCTTCTTC 
GCTATCTGGA TAATTCCAGC ATTGGTTGCT GGTTTAATTG GATTTCTTGT TTTCAGGAAT 
AGAATCAAAG GGGTTTATTT TTCTATACTT ACTCAAGCTT CTCTTCTTGT ATTTTTTAAC 
TTCTTTAATG GACAACAAAA ACTTATAAAT GGAACAAATG GATTAAAAAC AGATGTAACA 
CAACTATTTG GTCAAATGGT AGGCTCTGAG TCTATGCAAA GAATATTCTT TTGGATAACC 
GCCATACTAG TAATAGCAGC ATGGTTTTTT GCAAAGTGGG TAGTTAAAGG AAGATTTGGG 
AATATACTTA TAGGAATCCG AGATGATGAA CCAAGAGTTA GGTTTACAGG ATATAACCCA 
GTTATATTCA AGACGATAAT ATTTTCTATT GCTGGAGGAC TCGCTGGAAT TTCGGGAGCT 
TTATATACCG TTCAGTCTGG GATAGTATCC CCTCAATTTA TGACAGTTCC CTTTTCTATA 
GAAATGGTTA TATGGGTTGC TGTTGGAGGA AGAGGAACTT TATTGGGAGC GATACTAGGA 
GCAGTTTTTA TCAACTATGC AAAAAGTCTT GTAAGTGAAG CTTTACCTGC TAGCTGGATG 
TTTATTCAAG GAGGGTTATT TATATTAGTT GTAACAGCTC TGCCAGAGGG AGTTTTAGGA 
TGGATTCAAG GAGATGGTCC TAGGAATCTT CTTCAAAAAT TTGGTTTGAA AAGAAAGATT 
GAAACCTATC CAAGCTTAGA AGTTAACAAT AAGGAGGGGA ATAATGAATA A 

 

Protein sequence

MSLSKIKFDK KIVLSFWIIL IALIIAAPTI LPVFRLNLLG RYLSLSIVAL GVDLIWGYTG 
LLSLGQGIFF ALGGYCAAMY LQITSSSEFP NNIPEFFALY GVEKLPFFWE PFRSPVFTFF 
AIWIIPALVA GLIGFLVFRN RIKGVYFSIL TQASLLVFFN FFNGQQKLIN GTNGLKTDVT 
QLFGQMVGSE SMQRIFFWIT AILVIAAWFF AKWVVKGRFG NILIGIRDDE PRVRFTGYNP 
VIFKTIIFSI AGGLAGISGA LYTVQSGIVS PQFMTVPFSI EMVIWVAVGG RGTLLGAILG 
AVFINYAKSL VSEALPASWM FIQGGLFILV VTALPEGVLG WIQGDGPRNL LQKFGLKRKI 
ETYPSLEVNN KEGNNE