Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A9601_08271 |
Symbol | ccmC |
ID | 4717532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. AS9601 |
Kingdom | Bacteria |
Replicon accession | NC_008816 |
Strand | + |
Start bp | 716102 |
End bp | 717031 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640078539 |
Product | putative heme transporter |
Protein accession | YP_001009218 |
Protein GI | 123968360 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.958198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACTAG ATAATTTTTT TAAAAATTTA ATATATGAAC CGGTTTCAGT TTTAGGTCTT TTAGTTTTTT ATTTTTTATT AATTAACTTG CCGATTTCTT TGGGTGCAGT TTTTAAAAAA AAGTCTTCTT CTGCGGTAAG ACTTATTACG ATTTTAGTGA ACTTATTAAT AACATTACAA TTACTTTTTA GGTGGTCAAT TTCTGGACAT TTTCCTATTA GCAATTTGTA TGAATCTCTC TATTTCCTTA CTTGGGGTAT CACATTAGGT CAACTATTGG TTGAAAGAGA ATACCAAGCT CCAATAATTC CCTCAATTGC CATACCTATT GAGTTACTGA CGGTGGCTTT TGCTTGTTTC GTTTTACCTG AGGATTTGAA ATTATCATCC AACTTAGTTC CAGCTTTAAG GTCTAGTTGG TTAGTTATGC ATGTTAGCGT GGTAATGCTT AGTTATGCAG CATTAATAAT AGGTTCTTTA CTTTCAATGT CCGTTTTGTT TATTAATAAA AATAAGCCGC TTCAAATCAG AAGTAGTTCT ACAGGTATAG GAGGATTTAA ACTTTCAAAT AGCTATCCTG TAAATGATTT AGTTGAACCT ATTGAATTTT CTCATTCAGA AGAATTAGAT ACATTAAGTT ATCGTTCTAT ATTAGTAGGT TTTGTTCTTT TGACTCTCGG TTTAATTTCA GGTGCAGTTT GGGCTAATGA GGCTTGGGGC ACATGGTGGA GTTGGGATCC AAAAGAAACA TGGGCATTTA TATCATGGTT GTTTTATGCG GCTTATCTGC ATATGAGAAT TAGTAAGGGT TGGCAAGGAC GCAAACCAGC ATTATTAGCA TCTACAGGCT TTTTAGTTGT TTTAGTTTGT TATTTAGGAG TTAATTTTTT AGGAATAGGG TTACATAGTT ATGGATGGAT ATTTGGGTGA
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Protein sequence | MILDNFFKNL IYEPVSVLGL LVFYFLLINL PISLGAVFKK KSSSAVRLIT ILVNLLITLQ LLFRWSISGH FPISNLYESL YFLTWGITLG QLLVEREYQA PIIPSIAIPI ELLTVAFACF VLPEDLKLSS NLVPALRSSW LVMHVSVVML SYAALIIGSL LSMSVLFINK NKPLQIRSSS TGIGGFKLSN SYPVNDLVEP IEFSHSEELD TLSYRSILVG FVLLTLGLIS GAVWANEAWG TWWSWDPKET WAFISWLFYA AYLHMRISKG WQGRKPALLA STGFLVVLVC YLGVNFLGIG LHSYGWIFG
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