Gene A9601_08241 details

Gene Information

• Locus tag: A9601_08241
• Symbol: typA
• ID: 4717529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: +
• Start bp: 712982
• End bp: 714778
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640078536
• Product: tyrosine binding protein
• Protein accession: YP_001009215
• Protein GI: 123968357
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCATCTT CGATAAAAGA AATTAGAAAT GTTGCAATTA TTGCTCACGT AGATCATGGG 
AAGACAACGC TTGTAGATGC ATTGTTATCT CAATCAGGAA TATTTAGAGA CAATGAAGTT 
ATACCTACAT GTGTAATGGA TTCAAATGAT CTTGAGAGAG AAAGGGGGAT AACAATACTC 
TCAAAAAATA CTGCAGTTAA CTACAAAGAC ACCAGAATTA ATATTATAGA TACACCTGGA 
CATGCTGATT TTGGAGGAGA AGTTGAAAGG GTTTTGGGAA TGGTGGATGG TTGTCTGCTT 
ATTGTTGATG CAAATGAGGG ACCTATGCCT CAAACAAGAT TTGTTTTAAA AAAAGCATTA 
GAAAAAGGAC TTAGACCTAT CGTCTTTGTA AATAAAATTG ATAGACCACG AGTAGTACCA 
GAAATAGCAA TTGATAAGGT CCTTGATTTG TTTTTGGAGT TAGGAGCTGA TGATGATCAA 
TGTGATTTCC CTTATCTTTT TGGGAGTGGA TTATCTGGTT TTGCAAAAGA AGAGATGGAA 
TCTAATAGTG ACAATATGAT GCCTCTTTTT GAAGCTATTA TCAGACACGT TCCTCCTCCA 
GTAGGTGACT CTAATAAGCC TCTTCAGCTA CAAATAACTA CTTTGGACTA TTCTGATTTC 
TTAGGCAGAA TAGTAATCGG AAAGATCCAC AACGGGACTA TAAAAAATGG CCAACAGGCT 
AGTTTAATAA AGGAAAACGG AAAAACTATT AAAGGTAAGG TTAGTAAACT TTTAGGATTT 
GAAGGATTAC AAAGAATTGA TATAAATGAA GCATTTGCAG GTGATATTGT TGCTGTTTCT 
GGTTTCGATG ACGTCAATAT TGGTGAGACC ATAGCATGTC CCGACTCTCC TCATCCTCTT 
CCATTAATCA AAGTAGATGA ACCTACCTTA AATATGACTT TTGTTGTAAA TGATTCACCA 
TTTGCGGGTA AGGAAGGGAA ATTTGTTACT AGTAGACAAT TAAAAAATAG ATTGGAGAGG 
GAACTTTTAA CAAATGTTGC CTTGAGAGTG GAAGAAACTG ATTCTCCCGA TAAGTTCTCA 
GTTTCAGGAA GAGGAGAATT ACATTTAGGT ATTTTGATTG AAACCATGAG AAGAGAAGGG 
TTCGAGTTTC AAATCTCACA ACCTCAAGTA ATTTTTAGAG AAATTGATAA TGTTGAATGT 
GAGCCTATAG AGACTTTGGT CCTTGATGTG CCTGAAGTAT CCGTTGGTTC TTGTATAGAA 
AAACTTGGAT CGAGAAAGGC AGAGATGAAA AATATGCAGA CAAGTTCAGA TGGGAGAACC 
CAATTAGAGT TCCTTGTGCC ATCAAGGGGA CTAATTGGAT TTCGTGGAGA ATTTGTCCGG 
ATAACAAGAG GTGAAGGTAT CATGAGTCAT TCGTTTTATG AATACAAACC TAAAACAGGA 
GATTTTGAAA CTAGAAGAAA TGGAGTCCTT ATAGCTTTTG AGGAAGGTGT GGCCACGTTC 
TATGCATTAA AGAATGCTGA AGATAGGGGA GTCTATTTCA TTAAACCTGG AGTTAAAGTT 
TATAAGGGAA TGATAATTGG AGAGAATAAT CGACCTCAAG ATCTTGAGTT AAATATATGT 
AAAACTAAGC AGTTGACTAA TATGAGGTCT GCAGGGGCAG AAGAACTTGA TACTTTGCAG 
TCACCTGTTG ACATTACCCT TGAAAGAGCA CTCGAATATA TTGGTCCAGA TGAAATGCTT 
GAGGTAACAC CAGATTCAAT AAGAATGAGA AAAATAAATA AAAAGAAAAG AAATTAA 

 

Protein sequence

MSSSIKEIRN VAIIAHVDHG KTTLVDALLS QSGIFRDNEV IPTCVMDSND LERERGITIL 
SKNTAVNYKD TRINIIDTPG HADFGGEVER VLGMVDGCLL IVDANEGPMP QTRFVLKKAL 
EKGLRPIVFV NKIDRPRVVP EIAIDKVLDL FLELGADDDQ CDFPYLFGSG LSGFAKEEME 
SNSDNMMPLF EAIIRHVPPP VGDSNKPLQL QITTLDYSDF LGRIVIGKIH NGTIKNGQQA 
SLIKENGKTI KGKVSKLLGF EGLQRIDINE AFAGDIVAVS GFDDVNIGET IACPDSPHPL 
PLIKVDEPTL NMTFVVNDSP FAGKEGKFVT SRQLKNRLER ELLTNVALRV EETDSPDKFS 
VSGRGELHLG ILIETMRREG FEFQISQPQV IFREIDNVEC EPIETLVLDV PEVSVGSCIE 
KLGSRKAEMK NMQTSSDGRT QLEFLVPSRG LIGFRGEFVR ITRGEGIMSH SFYEYKPKTG 
DFETRRNGVL IAFEEGVATF YALKNAEDRG VYFIKPGVKV YKGMIIGENN RPQDLELNIC 
KTKQLTNMRS AGAEELDTLQ SPVDITLERA LEYIGPDEML EVTPDSIRMR KINKKKRN