Gene A9601_08041 details

Gene Information

• Locus tag: A9601_08041
• ID: 4717510
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. AS9601
• Kingdom: Bacteria
• Replicon accession: NC_008816
• Strand: -
• Start bp: 691399
• End bp: 693312
• Gene Length: 1914 bp
• Protein Length: 637 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640078518
• Product: FtsH ATP-dependent protease-like protein
• Protein accession: YP_001009197
• Protein GI: 123968339
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0315531
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCAAA AATTTAAAAC ATTAATTTTA TGGGCTTTAC CTATACTTTT AGTAATAGCA 
CTTTCCTACC AATTTTTATC TTCAAGCAAC GTTGATTCAC TTAAATCTAA CGGGACTACT 
GTTGCGCCAA GAAATTCAGC GGTAGCAAGA GTTAGTTACG GCAGATTTTT AGATTACATT 
AATTCGGGAA GGGTTACATC TGTCGATATT TTTGAGGGAG GCAGAAATGC AGTTATAGAG 
ACCATAGATT CGGATTTAGA TAATAAAGTT CAAAGGTTGC GTGTAGATCT TCCCGGCTTA 
ACACCAGAAC TTATAAATAT TTTAAAAAAA GAGGGAATTA GTTTTGATGT TCATCCAATA 
AAAACAGCTC CCCCTGCATT AGGAATTTTA GGTAATTTAC TCTTCCCGGC TATCTTAATT 
GGAGGTTTAA TTTTGTTAGC GAGGAGGTCA AATGGTATGC CTGGGGGGCC TGGACAAGCA 
ATGCAGTTTG GGAAAACTAA AGCAAGATTT GCAATGGAAG CTGAAACAGG AGTTGTATTC 
GATGATGTTG CAGGCGTTAA TGAAGCTAAA CAGGATTTGC AAGAAGTTGT TACTTTTCTG 
AAAAAACCAG AAAAATTTAC TTCTGTAGGA GCAAGAATTC CCAAAGGGGT TCTATTAGTA 
GGACCTCCTG GTACTGGTAA AACCCTTTTA GCTAAAGCAA TTGCAGGTGA AGCTGGTGTT 
CCATTCTTCT CATTATCAGG TTCTGAATTT GTTGAAATGT TTGTTGGTGT TGGAGCTAGT 
AGAGTAAGAG ACCTTTTCAA AAGAGCTAAA GAGAATAGTC CCTGTTTAAT TTTTATTGAT 
GAAATCGACG CAGTCGGAAG GCAAAGAGGT GCAGGTATTG GTGGAGGTAA TGATGAGAGA 
GAACAAACTC TCAATCAATT ACTTACTGAA ATGGATGGTT TCGAAGGTAA TAGTGGCATA 
ATAATAATTG CAGCCACAAA CAGGCCCGAT GTTCTAGACT CAGCGCTAAT GAGACCAGGC 
AGATTTGATA GGCAGGTAAC TGTAGATGCA CCTGATATCA AGGGCAGACT ATCAATATTG 
GAAGTTCATG CAAGGAATAA GAAACTTCAA GAGGATTTAA CGCTTGAAAG CATTGCGAGA 
AGAACACCAG GTTTTACTGG AGCAGATTTA GCAAATTTAT TAAATGAGGC TGCTATATTA 
ACTGCCAGGA GGAGAAAAGA CTCTATAAGT ATCTCAGAAA TTGATGACTC TGTAGATAGG 
ATTGTCGCAG GAATGGAAGG TTCCCCATTA ACAGATGGTA GAAGTAAGAG ATTAATTGCT 
TATCATGAAG TTGGCCATGC TCTCATAGGT TCACTTGTCA AAGCCCATGA TCCTGTTCAA 
AAAGTGACCG TCATTCCAAG AGGTCAAGCT AAAGGATTAA CTTGGTTTAC CCCAGATGAC 
GAACAAACCC TTGTTAGCAG GGCGCAATTA AAAGCTAGGA TAATGGGTGC TTTAGGTGGA 
AGAGCTGCTG AAGATGTTGT TTTTGGAGAA GGTGAGATTA CAACAGGAGC TGGAGGTGAT 
TTTCAACAAG TTGCTTCAAT GGCTCGCCAA ATGGTTACTA GATTTGGAAT GAGTAATTTA 
GGTCCGATAG CTTTAGAAAG TGGTAATCAA GAAGTATTTG TTGGTAGAGA TTTAATGACT 
AGAAGTGAAG TTTCTGATTC AATTTCTAAA CAAATAGATG AAAGTGTAAG AATAATGGTA 
AAAGAATGTT ATAAAGAGAC CTACGATATA GTAAGCAAAA ATAGAGAAGC TATGGATAAG 
ATAGTTGACC TATTAATCGA AAAAGAGACA TTAGATGGTG ATGAATTTGT AAGTATTCTC 
TCCAAATTCA CCAAAATTCC TGAGAAAGAC AGAACACCTC AATTATTAAG CTAA 

 

Protein sequence

MNQKFKTLIL WALPILLVIA LSYQFLSSSN VDSLKSNGTT VAPRNSAVAR VSYGRFLDYI 
NSGRVTSVDI FEGGRNAVIE TIDSDLDNKV QRLRVDLPGL TPELINILKK EGISFDVHPI 
KTAPPALGIL GNLLFPAILI GGLILLARRS NGMPGGPGQA MQFGKTKARF AMEAETGVVF 
DDVAGVNEAK QDLQEVVTFL KKPEKFTSVG ARIPKGVLLV GPPGTGKTLL AKAIAGEAGV 
PFFSLSGSEF VEMFVGVGAS RVRDLFKRAK ENSPCLIFID EIDAVGRQRG AGIGGGNDER 
EQTLNQLLTE MDGFEGNSGI IIIAATNRPD VLDSALMRPG RFDRQVTVDA PDIKGRLSIL 
EVHARNKKLQ EDLTLESIAR RTPGFTGADL ANLLNEAAIL TARRRKDSIS ISEIDDSVDR 
IVAGMEGSPL TDGRSKRLIA YHEVGHALIG SLVKAHDPVQ KVTVIPRGQA KGLTWFTPDD 
EQTLVSRAQL KARIMGALGG RAAEDVVFGE GEITTGAGGD FQQVASMARQ MVTRFGMSNL 
GPIALESGNQ EVFVGRDLMT RSEVSDSISK QIDESVRIMV KECYKETYDI VSKNREAMDK 
IVDLLIEKET LDGDEFVSIL SKFTKIPEKD RTPQLLS