Gene A9601_07841 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA9601_07841 
Symbol 
ID4717490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. AS9601 
KingdomBacteria 
Replicon accessionNC_008816 
Strand
Start bp682181 
End bp683167 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content29% 
IMG OID640078498 
ProductRNA processing exonuclease 
Protein accessionYP_001009177 
Protein GI123968319 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.160717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGAACTA AACAAGAATA TTTAATTAGA TATAAAGATG GAAATCTTTA TTGTGAACTT 
GCTGATATTT GGATTGATCC AAGCAAGCCA GTAAAAAAGG CATTAATAAC TCATGCTCAT
TTTGATCACT TTACATTTGG CTGTGAAGAA TACATTTCTA CTAAGGAAAC TGCCATTCTT
CTTAAAGAAA GAGTTGGAGA TAATATCAAA ATCAAGACTT TTGAATATGC AGAAGAATTT
AAGATAAATG GCATTAATAT TTCTTTTCAT CCATCCGGTC ACATCCTTGG ATCTAGTCAA
ATAAGGTTTA TTTTTGCTGA AGAAAAATGG CTAATTTCAG GTGACTTTAA ACTTCAAAAA
GATCAGACTT GCAAACAATA TGAAATAGTA AAAACTGATT ATTTAATAAG CGAATGTACC
TTTGGTTTGC CAATATTTAA GTGGGATGAA TCAAATAAAA TAGCAAATGA TATTTCAAAA
TGGATAACTA ATACACCAGA AAAAACTTCT TTACTTTTCT GCTATTCACT TGGAAAAGCT
CAGAGATTGT TAAACGAAAT TAGTCAAACA AATTTTAAAG GCAATATTTA TTCCCATGCC
AGTATTCACA AAATGAACAA AAGTTATAGG GAACTTGGAA TTGATATTAA AGATACTATA
AAAATTGAAA ATAAAAAAAA AATTGATGAA CTTAAAGGAA GTCTTATATT ATTACCGCCA
TCTTTAAGTA AGGGTTCTTA TTTGAAAAAT TTAAAAAATA TTCAAACAGC TTTCGCGAGT
GGATGGATGT CAATAAGAGC TCTAAGAAAA AGATCAGGAT ATGATAAAGG ATTCGCAATC
TCTGATCATG CTGATTGGGA TGGAATTCTG GAAGTAGTAA AAAAGTCTGA AGCAAAAAAT
GTATTTTTTC ATCATGGAGA TAGTGAAGCC TTAAGTAAAT ATTTGGTTGA AAAGGAATCA
ATAAATGTAC TTTTATTCGG TAAATAA
 
Protein sequence
MRTKQEYLIR YKDGNLYCEL ADIWIDPSKP VKKALITHAH FDHFTFGCEE YISTKETAIL 
LKERVGDNIK IKTFEYAEEF KINGINISFH PSGHILGSSQ IRFIFAEEKW LISGDFKLQK
DQTCKQYEIV KTDYLISECT FGLPIFKWDE SNKIANDISK WITNTPEKTS LLFCYSLGKA
QRLLNEISQT NFKGNIYSHA SIHKMNKSYR ELGIDIKDTI KIENKKKIDE LKGSLILLPP
SLSKGSYLKN LKNIQTAFAS GWMSIRALRK RSGYDKGFAI SDHADWDGIL EVVKKSEAKN
VFFHHGDSEA LSKYLVEKES INVLLFGK