| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A9601_06911 |
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| Symbol | mscS |
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| ID | 4717394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. AS9601 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008816 |
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| Strand | - |
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| Start bp | 613875 |
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| End bp | 614906 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640078404 |
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| Product | small mechanosensitive ion channel |
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| Protein accession | YP_001009084 |
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| Protein GI | 123968226 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.412375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAG TTACTGAAAA CTTCCTTCTG GCAATATCTA TTTTTTTTAT TGGAATTTTA
TTGTCGATAA TAATTTCAAA ACTTTCAAAA ATATTCTTCA AAAAGATCTC CAAGCGTACA
AAGACAAATT TTGATGATTT TATTTTTGAG GTCATCTCTG GAATTGTTAA ACCAATAGGT
TTCCTTCTCT CATTTTATTT TTCAATTGAC TACTTTTTTG CTGATGAAAT AACTTTTATC
TCTGTATTAT TAAATATTCT GAAATTATTC ATATTGATAA TAATTATAAA AGCTCTCAAT
AAAGTTTTAA TAAGATCTTT AACAGAATCG ACATCGAAAA TTAATGATTC CTCAATCAGT
TCAATGATAT CTTCACTTAC TCCTTTAATA AAAGCATTAA CATGGACTAT TGGTTCAATC
TTTTTCTTAC AAAATATAGG TGTTCAAATG ACCGCAATTT GGGCTCTCCT AAGTGCAGGG
GGTATTGGAG CAGGATTAGC TTTGAAAGAC CCAGTTCAGG AGTTTTTTGA ATACATAACA
ATTTTGCTTG ATAAACCTTT TCAAAAAGGT GAGTTTATAA AATCTGATGG CGTCCTTGGA
ATGGTTGAGA GGGTCGGAGT AAGGTCCTCA AGAATAAGAA GTATCAATGG AGAAGTAATA
GTAATGAGCA ACAGCGCCCT TACAAATGGA ATAATTTCAA ATTACGCACA AATGGAAAAA
AGAAGGTTAG TGCATAAATT AGGAGTTGTT TATGAAACCT CGCCAAAACT TATGAAATTG
ATTCCAATAA TAATAAAAAA AATAGTTGAA GAGACAAAAG ATGCCTCTTT TGATAGGTGT
CATTTCACAG ACTTTGGCGA CTTCAGTCTT AATTTCGAAC TAGTTTATTA CATCCCAACA
AATAATTATC TCGCTGCAAT GGAAGCTCAA CAATCTATAA ATTTAAGAAT TATTGAGGAA
TTTGCGGTTA ATAATATAGA GTTTGCATTC CCAACACAAA CCTTAAATAT TGAAAGTAAC
AAAGCCAAAT GA
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| Protein sequence | MKLVTENFLL AISIFFIGIL LSIIISKLSK IFFKKISKRT KTNFDDFIFE VISGIVKPIG
FLLSFYFSID YFFADEITFI SVLLNILKLF ILIIIIKALN KVLIRSLTES TSKINDSSIS
SMISSLTPLI KALTWTIGSI FFLQNIGVQM TAIWALLSAG GIGAGLALKD PVQEFFEYIT
ILLDKPFQKG EFIKSDGVLG MVERVGVRSS RIRSINGEVI VMSNSALTNG IISNYAQMEK
RRLVHKLGVV YETSPKLMKL IPIIIKKIVE ETKDASFDRC HFTDFGDFSL NFELVYYIPT
NNYLAAMEAQ QSINLRIIEE FAVNNIEFAF PTQTLNIESN KAK
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